Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2960 |
Symbol | |
ID | 6124621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3292229 |
End bp | 3293515 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641639552 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001766240 |
Protein GI | 170734293 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.735556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.776936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG TGCAACAGGA GCGTCCGGCC GCCGCGTCGC CGTACCGGTT CGAGCGGGAG ATGAGCTCCG GCCTCGAACG ACTGGCGACG CAGCATCGCG ACCTGACGCT CACGACCGTG TTCCAGCCGA TATTCAGCCT GTCGCATCAG CGCGCGGTGG GCTACGAGGC GCTGCTGCGC GCGCACGATG CGCTCGACCG CGCCGTGTCG CCGCTCGACG TGTTCGGCGA AGCCGCGCGC CGCGACGAAC TGCTGCAGCT CGACCGGCTC GCGCAGGCGC TGCATCTGGA GAATTTCGCG CTGCTCGGCG CGGAGCGCGA GTGGCTGTTT CTCAACGTCC ATCCCGGCGT GCTCACCGAC CCGTTCCAGG CGGCCGCGCT GCTCGCGAAC CTGAAGCGGC TCGGCATGCC GCCCCGCCGC ATCGTGCTCG AGGTGCTCGA ACAGCGCGCG GACGACGTCG AGCGGCTCGC GGAGGCCGTG CGCGAATTCC GCACGCACGG CTTCCTGATC GCGCTCGACG ATTTCGGCGC GGGCCACTCG AACATCGAAC GGATCTGGCA ACTGAACCCG GACATCGTGA AGCTCGACCG CATCATGCTG TCGCACGCGG CGCACCGCAC CGGGCTCACC GCGATCCTGC ACGGGCTCGT GACGCTATTG CACGAGGCCG GCAAGCTGGT GCTCGTCGAA GGGATCGAGA CCGAGCACGA AGCGCAGATC GCGCTGTCGT GCGAGGCCGA TTTCGTGCAG GGCTACTACT TTGGCCGCCC GGCGCCGGGG CTGCCCGACA GCGCGGCCGC GACCGGCTGC ATCGGCGAGC TGACCGAGCG CTTTCGTCAG CAGACCGAAG CGCGCGAGCG GCGCGACACG CAGCGGCTCG CCCCGTACCT GCGCGCGTTC GAACGTGCGG CCGAGCGCCT CGAGGCCGGC GAGCCGCTCG ACGAAGTGTG CTGGAATTTC CTCGCGCTCG ACGCCGCCGC GCGCTGTTTC CTGCTCGACG CGCAGGGCCG GCAGTCGGGC CGCAACGTCG TGCTGCGCGC CGATCGCGCG CTGGCCGAGG CGCGTTTTTC GCCGCTGGCG GACGCGCAGG GCGCGAACTG GCTGCGCCGG CCGTATTTCC GCTCGGCGAT CGCCGAGCCG GGGCGCGTGC AGGTCACGCG GCCGTACCTG TCGATCAACG AGGCGCAGCC GTGCGTGACG CTGTCGGTGG CCGTGCGCGT CGGCGATGCG CAGCGCGTGC TGTGCGGCGA TATCGACTGG CTCGACGACG ACGCGCAGGC CGCGTAG
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Protein sequence | MTIVQQERPA AASPYRFERE MSSGLERLAT QHRDLTLTTV FQPIFSLSHQ RAVGYEALLR AHDALDRAVS PLDVFGEAAR RDELLQLDRL AQALHLENFA LLGAEREWLF LNVHPGVLTD PFQAAALLAN LKRLGMPPRR IVLEVLEQRA DDVERLAEAV REFRTHGFLI ALDDFGAGHS NIERIWQLNP DIVKLDRIML SHAAHRTGLT AILHGLVTLL HEAGKLVLVE GIETEHEAQI ALSCEADFVQ GYYFGRPAPG LPDSAAATGC IGELTERFRQ QTEARERRDT QRLAPYLRAF ERAAERLEAG EPLDEVCWNF LALDAAARCF LLDAQGRQSG RNVVLRADRA LAEARFSPLA DAQGANWLRR PYFRSAIAEP GRVQVTRPYL SINEAQPCVT LSVAVRVGDA QRVLCGDIDW LDDDAQAA
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