| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2903 |
|---|
| Symbol | |
|---|
| ID | 6124565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3230605 |
|---|
| End bp | 3231915 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641639496 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001766184 |
|---|
| Protein GI | 170734237 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.392153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGT CTTCCCAAGG CCTCAAGTCC CTCGCTTCCT CCATCGCCTT CGGCACCGCC
GCGCGCAACG TCGCGCTCGG CGTGATGCTG CCCGTCGCGC TCGCCTCGAC GATCGTCGTC
GCCGAGGCGA AGCCGGCCGC CAAGGCCAAG GCCGCGCATG CGGCGCCGGC CGCCGAGCAG
TTCACCGGCG CGCCCGCGAC CTACATGCCG GGCGCGGTGC CGCCGCCGGG CGTGAACGCG
CGCTCGTGGG TGCTCGTCGA CGCGACGAGC AACACGGTGC TCGCGTCGGG CAATGCGGAC
GAACGCGTCG AGCCGGCGTC GCTGACGAAG CTGATGACGG CCTACCTCGT GTTCGAGGCG
CTCGACAAGA AGAAGATCTC GATGGAGCAG ATCGTCACGC CGAGCGACGC AGTGCGCCGC
GTCGGCCGCG ACGAGTCGCG CATGTTCATC GAGGCGAACA AGCCGGTGTC CGTGCACGAC
CTCGTGTACG GGATGATCAT CCAGTCGGGC AACGATGCCG CGATCGCGCT GGCCGAGCTC
GTCGGCGGCA GCGAAGGGCA GTTCGTCACG ATGATGAACG ACGAGGCAGG GCGCCTCGGC
ATGAAGGGCA CGCACTTCGC CGACGTGAAC GGCATGCCCG ACCCGAACCA CTACACGACG
GCCGGCGACC TCGCGAAGCT GTCGGCCCAC CTGATCCGCG ATTTTCCGCA GTACTACAGC
ATCTTCTCGG AGAAGGAATT CAAGTACAAC AACATCCGCC AGGGCAACCG CAACCGGCTG
CTGTGGCTCG ACCCGACGGT CGACGGCCTG AAGACCGGCC ATACGCAGGC GGCCGGTTAC
TGCCTGATCG CGTCGGCGAA GCGCGCGATC CCGGGCGTCG ACGGCCAGCG CCGCCTGGTG
TCGGTGATGA TGGGCGAGCA GAAGGAAAGC GAGCGTACGC AGGACAGCAT GAAGATGCTG
AACTACGGCT ACAGCGCGTT CGATTCGGTG CGCCTGTTCA AGGGCGGCCA GGCGATCTCG
ACGCCGCGCA TCTACAAGGG CAAGGACAAC ACCGTGCAGG TCGGCGTGAA GGGCGACCAG
TGGGCGACCG TGCCGCGCGG CCTCGGCGAC AAGGTCAAGA CCGAGGTCGA CGTCAACGCG
CCGCTGATCG CGCCGCTCGC CGAAGGCCAG CAGGTCGGCA CCGTGAAGAT CGTCGCCGAC
GGCAAGACGC TGTCCGAATT CCCGGTCGTC GCGCTGCAAG CCGTCCCGGA AGCGGGTATC
TTCGGACGTA TCTGGGACTC GATCCTGCTG ATGTTCAGCA AGAAGAAGTA A
|
|---|
| Protein sequence | MRLSSQGLKS LASSIAFGTA ARNVALGVML PVALASTIVV AEAKPAAKAK AAHAAPAAEQ
FTGAPATYMP GAVPPPGVNA RSWVLVDATS NTVLASGNAD ERVEPASLTK LMTAYLVFEA
LDKKKISMEQ IVTPSDAVRR VGRDESRMFI EANKPVSVHD LVYGMIIQSG NDAAIALAEL
VGGSEGQFVT MMNDEAGRLG MKGTHFADVN GMPDPNHYTT AGDLAKLSAH LIRDFPQYYS
IFSEKEFKYN NIRQGNRNRL LWLDPTVDGL KTGHTQAAGY CLIASAKRAI PGVDGQRRLV
SVMMGEQKES ERTQDSMKML NYGYSAFDSV RLFKGGQAIS TPRIYKGKDN TVQVGVKGDQ
WATVPRGLGD KVKTEVDVNA PLIAPLAEGQ QVGTVKIVAD GKTLSEFPVV ALQAVPEAGI
FGRIWDSILL MFSKKK
|
|---|
| |