| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2898 |
|---|
| Symbol | lipB |
|---|
| ID | 6124560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3227050 |
|---|
| End bp | 3227796 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641639491 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_001766179 |
|---|
| Protein GI | 170734232 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTT CGCCGGTTTC CATCGTGTCC ACGCCTGTCG CCGTTTCCGC ATCGCCCGCC
GGAGCTCCGG TCCAGCCGGT CACCGTGCGG TGGCGGGGCC GCGAGGCATA CGAGGCGAGC
TTCGACGCGA TGCGTGCGTT CACCGACACG CGCACGGCCG ACACCGGCGA CGAGATCTGG
GTGGTCGAGC ATCCGCCCGT CTACACGCTC GGCCAGGCCG GCGACCCGGC GCACCTGCTG
GTGGCCGACA GCGGCGTGCC GCTCGTGAAG GTCGACCGCG GCGGACAAAT CACCTACCAC
GGCCCCGGCC AGATCGTCGT CTACCTGCTG CTGGACCTGC GCCGGCGCAA GCTGATGGTG
CGCACGCTCG TGACGAAGAT CGAGGAGGCC GTGATCGAAA CCCTCGCGGC GTATAATCTC
GCTTCGGTCC GCAAGGCGGG CGCACCCGGG ATCTACGTGG CGTCCGGCGT GCACGAGGGC
GCGAAGATCG CGGCCCTCGG CCTGAAGATC CGCAACGGCT GCAGCTATCA CGGGCTGAGC
CTGAACGTGA AGATGGATCT GCGCCCGTTT CTTGCGATCA ACCCGTGCGG CTATGCCGGA
CTGGAAACCG TCGACATGGC GAGCCTCGCG GTTGCCGCCG ACTGGAACGA CGTCGCCCAC
ACGCTGGTGG GCCGTCTGAT CGCCAACCTC GACGGCGCAT CCGCGGCCGC CGACAAGCCG
CACGCACTGG AACAATCGAA TGACTGA
|
|---|
| Protein sequence | MSVSPVSIVS TPVAVSASPA GAPVQPVTVR WRGREAYEAS FDAMRAFTDT RTADTGDEIW
VVEHPPVYTL GQAGDPAHLL VADSGVPLVK VDRGGQITYH GPGQIVVYLL LDLRRRKLMV
RTLVTKIEEA VIETLAAYNL ASVRKAGAPG IYVASGVHEG AKIAALGLKI RNGCSYHGLS
LNVKMDLRPF LAINPCGYAG LETVDMASLA VAADWNDVAH TLVGRLIANL DGASAAADKP
HALEQSND
|
|---|
| |