Gene Bcenmc03_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2865 
Symbol 
ID6124527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3188122 
End bp3188616 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID641639458 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001766146 
Protein GI170734199 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.794301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG TCGAAAACCA ACCGTTCTTC AACATCCAGC GCGTCTACCT GAAGGATATG 
TCGCTCGAGC AGCCGAATTC GCCGGCGATC TTCCTCGAGC AGGACATGCC GTCGGTTGAA
GTCGAAGTCG ACGTCAAGGC CGACCGTCTC GCGGAAAGCG TGTTCGAAGT CGTCGTGTCG
GGTACCGTCA CCGCGAAGGT GAAGGACAAG GTCGCATTCC TGATCGAAGC GAAGCAGGCC
GGCATTTTCG ACATCCGCAA CATTCCGGAC GAACAGCTCG ATCCGCTCGT CGGCATCGCA
TGCCCGACGA TCCTGTTCCC GTACCTGCGC TCGAACATCG CCGACGCGAT CACGCGCGCC
GGCTTCCCGC CGATCCACCT CGCGGAAATC AACTTCCAGG CGCTGTACGA GCAGCGTCTC
GCGCAGCTTC AGCAGCAAGC CGGTGCCGCA GCAGGCGCAC CGAACGGCGC GCCGAATGGC
ACGACGCTGA ACTGA
 
Protein sequence
MSDVENQPFF NIQRVYLKDM SLEQPNSPAI FLEQDMPSVE VEVDVKADRL AESVFEVVVS 
GTVTAKVKDK VAFLIEAKQA GIFDIRNIPD EQLDPLVGIA CPTILFPYLR SNIADAITRA
GFPPIHLAEI NFQALYEQRL AQLQQQAGAA AGAPNGAPNG TTLN