| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2858 |
|---|
| Symbol | |
|---|
| ID | 6124520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3181660 |
|---|
| End bp | 3183258 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641639451 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_001766139 |
|---|
| Protein GI | 170734192 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.760436 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT TGGGTAAGGA TGCTATGAAA ACAATCAAGC GAGCCCTCAC GGGCGTGCTG
GCATGCAGCG GATTGCTCTT TGCCGGTGCG GCCCTGGCGG TCGGTGATAG CCCGGGCGGC
CCCCGTGTCA ACGAGATCAA CTTTCAGCCG CCTGTCACGA AGATCGCCGA GGAGCTCTAC
GATCTCCACA CGATGATGCT GATCCTGTGT ACGGTGATCT TCGTCGGCGT GTTCGGCGTG
ATGTTCTATT CGATCTTCGC GCACCGCAAA TCCAAGGGCC ACAAGGCCGC CAATTTCCAT
GAAAGCACGA CCGTCGAGAT CATCTGGACG ATCGTGCCGT TCGTCATCGT CGTACTGATG
GCGCTGCCGG CGACGAAGGC CGTCGTCGCG ATGAAGGACA CGACGAACGC CGATCTCACG
ATCAAGGTCA CCGGCTACCA GTGGAAGTGG GGCTACGACT ACGTGAAGGG CCCGGGCGAG
GGCATCGGCT TCCTGTCGAC GCTGACCACC CCGCGCGACG AAGTGATGGG CAAGAAGCCG
ATCACCGACA CCTATCTGCA GGAAGTCGAC AACCCGCTCG TCGTGCCGGT CAACAAGAAG
ATCCGCATCA TCACGACCGC GAACGACGTC GTCCACTCGT GGTACGTGCC CGCGTTCGGC
GTGAAGCAGG ATGCGATTCC CGGCTTCGTG CGCGATACGT GGTTCAAGGC TGACAAGGTC
GGCACGTTCC GCGGTTTCTG TACCGAGCTG TGCGGCAAGG AGCACGCGTA CATGCCGGTC
GTCGTCGAAG TCCTGTCGGA CGACGACTAC GCGAAGTGGG TCAGCGCGCA GAAGGCCAAG
CTGGCCAGCG CGGCGGTCGA CCCGAACAAG GTCTACACGA TGGCCGAACT CGTCGCGCAC
GGCGAGGAAG TCTACAAGGC GAACTGCGCG GCCTGCCACC AGGTGAACGG CAAGGGCCTC
GGCGCGTTCC CGGCGATGGA CGGCAGCCCG ATCGTGAACG GCCCGATCGC CGCGCACGTC
GAGCGCGTGC TGCACGGCAA GGGCGCGATG CCGTCGTGGG CGTCGCTGTC GGACCTCGAC
ATCGCTTCGG TCGTCACGTA CGAACGCAAC TCGTGGGGCA ACCACAAGAA CGACCTGCTG
CAGCCGAAGC AAGTGGCTGA CGCACGCAAC GGCAAGCTGC CGGAAGACAC GGCGGGCGCG
GCAACGGCAG CGGCCCCGGC AGAAGCGGCT TCGGCACCGG CGCAAGCCGC GTCGGGCGCC
GAACAGCCGG CGGCAGCGGC ATCGGCTGCG CTGTCGACGA TCTACTTCGA GACGGGCAAG
AGCGTGCTGC CGGCCGACGC GAAAGCGGCG ATCGCCGCCG CGGCCGACTA TGCGAAGGCA
CATCCGGACG CGAAGCTCGC GTTGTCGGGC TTCACCGACA AGACGGGCTC GGCCGACGCG
AACACCGAAC TGGCGAAGCA TCGCGCGCAG GCCGTGCGTG ATGCGCTGAA GGCAGCAGGC
GTGGCGGAAG ACCACATTAT TCTCAAAAAG CCGGAAACGA TCACGGGCGG GGCTGACGCG
AAGGAAGCCC GGCGTGTCGA GATCGGCCCG GCGGCTTGA
|
|---|
| Protein sequence | MEILGKDAMK TIKRALTGVL ACSGLLFAGA ALAVGDSPGG PRVNEINFQP PVTKIAEELY
DLHTMMLILC TVIFVGVFGV MFYSIFAHRK SKGHKAANFH ESTTVEIIWT IVPFVIVVLM
ALPATKAVVA MKDTTNADLT IKVTGYQWKW GYDYVKGPGE GIGFLSTLTT PRDEVMGKKP
ITDTYLQEVD NPLVVPVNKK IRIITTANDV VHSWYVPAFG VKQDAIPGFV RDTWFKADKV
GTFRGFCTEL CGKEHAYMPV VVEVLSDDDY AKWVSAQKAK LASAAVDPNK VYTMAELVAH
GEEVYKANCA ACHQVNGKGL GAFPAMDGSP IVNGPIAAHV ERVLHGKGAM PSWASLSDLD
IASVVTYERN SWGNHKNDLL QPKQVADARN GKLPEDTAGA ATAAAPAEAA SAPAQAASGA
EQPAAAASAA LSTIYFETGK SVLPADAKAA IAAAADYAKA HPDAKLALSG FTDKTGSADA
NTELAKHRAQ AVRDALKAAG VAEDHIILKK PETITGGADA KEARRVEIGP AA
|
|---|
| |