Gene Bcenmc03_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2813 
Symbol 
ID6124940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3133407 
End bp3134369 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID641639406 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001766094 
Protein GI170734147 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.223011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC ACAGCCATGA TGGCCTGATG GTCTTTACTG GCAACGCGAA TCCCGCGCTC 
GCCCAGGAAG TCGTCAATAT CCTTGGTATC CCCCTCGGCA AAGCAATGGT CAGCCGTTTC
TCCGACGGCG AGATCCAGGT CGAGATCCAG GAAAACGTGC GCGGCAAGGA CGTCTTCGTC
CTGCAATCCA CGTGCGCACC GGCGAACGAC AACCTGATGG AACTGATGAT CATGGTCGAT
GCGCTCAAGC GCGCATCCGC TGGCCGGATC ACCGCTGCCA TCCCCTACTT CGGCTATGCG
CGTCAGGATC GTCGCCCGCG TTCGGCGCGC GTCGCGATCT CGGCGAAGAT CGTCGCGAAC
ATGCTGGAAA TCGCCGGCGT CGAGCGGATC ATCACGATGG ATCTGCACGC CGACCAGATT
CAGGGCTTCT TCGACATCCC GGTCGACAAC ATCTACGCGA CGCCGATCCT GCTGGGCGAC
CTGCGCAAGC AGAACTACTC GGATCTGCTC GTCGTGTCGC CGGACGTCGG CGGCGTGGTG
CGTGCCCGGG CACTCGCGAA GCAGCTGAAC TGCGATCTCG CGATCATCGA CAAGCGTCGC
CCGAAGGCGA ACGTCGCCGA AGTGATGAAC ATTATCGGTG AAGTCGAAGG CCGCACCTGC
GTGATCATGG ACGACATGGT CGATACGGCA GGCACGCTCT GCAAGGCTGC ACAAGTGCTG
AAGGAGCGCG GCGCGAAGCA GGTGTTCGCC TACGCGACGC ACCCGGTGCT GTCGGGCGGC
GCCGCCGAGC GTATCGCTGC ATCGGAACTC GACGAGCTGG TCGTCACCGA TACGATCCCG
CTGTCGGCCG AATCGCTGGC GTGCTCGAAG ATCCGCTCGC TGACGAGCGC GAGCCTGCTG
GCCGAGACGT TCTCGCGGAT TCGCCGCGGC GATTCGGTGA TGTCGCTGTT CGCGGAATCC
TGA
 
Protein sequence
MSSHSHDGLM VFTGNANPAL AQEVVNILGI PLGKAMVSRF SDGEIQVEIQ ENVRGKDVFV 
LQSTCAPAND NLMELMIMVD ALKRASAGRI TAAIPYFGYA RQDRRPRSAR VAISAKIVAN
MLEIAGVERI ITMDLHADQI QGFFDIPVDN IYATPILLGD LRKQNYSDLL VVSPDVGGVV
RARALAKQLN CDLAIIDKRR PKANVAEVMN IIGEVEGRTC VIMDDMVDTA GTLCKAAQVL
KERGAKQVFA YATHPVLSGG AAERIAASEL DELVVTDTIP LSAESLACSK IRSLTSASLL
AETFSRIRRG DSVMSLFAES