Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2810 |
Symbol | |
ID | 6124472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3129878 |
End bp | 3131701 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641639402 |
Product | TPR repeat-containing protein |
Protein accession | YP_001766091 |
Protein GI | 170734144 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CCTCGAAGCT GCTTCAGGAG CGCCCCGCCG CCGTGCGCGG CGCGCGCGCC TTCCCGGTCC GCCGTGCACT CGGTGCCGCG CTGTTTGCCG CCTGGACCCT CACCGCCTTT CCGGCCCACG CGCAGGATCC GGCATCGGAC GACGCGGAGC CGCAGGGTGC GTTCGAGCAT GTGATGCCGG ACGAGCAGAA AAATCTCCCC GGCGTGCCGC TGACGAGCCA GATCGTCTAC CAGGTGCTCG CCGCCGAGGT CGCGCTCCAG CGCAACCAGC CAGCGCCGGC CTACCAGACC TACCTCGCGC TGGCCCGCGA CACGCGCGAT CCGCGCATGG CGCAGCGCGC GACCGAAATC GCGCTCGGCG CACAGAGCCC GGCCGACGCG CTGTCCGCCG CGAACCTGTG GCGTCAATAC GCACCGGATT CGAACCGGGC GTCGCAGGTC GACGCCGCGC TGCTGGTGCT CGCCGGCAAG CCGGCCGACG CGCAGCCGAT GCTCGCGCGC GAGCTGGCCC GCGCGAGCGG CGACACGCGC GGCCCGGCGA TCCTCGCGCT GCAGGCGCTG CTGGTGCGCG GCCCCGACCG CGTCGGTGGC CTCGCGGTGC TGAAGGACAT GCTGAAGAAC GACATGAATC GCCCCGAGGC GCAGCTCGCG ATCGCGCGGC AGCAGCTCGC GGTCGACGAC AAGGACGGCG CCGCGCAGTC GCTGAAGCAG GCGCTGCAGC TCCGCCCCGA CTACCTGCCG GCAGCGCTGA TGCTGTCGCA GATGGGGCCG GCGGAACGTG CGGCGGGCAT CGCGTCGTTC GAGAAGTATG TTCAGCAGAA TCCGAAGTCG CGCGACGCGC GGCTGGCGCT GTCGCAGCTC TATCTCGCCG ACGATCGCCT CGACGACGCG CAGAAGCAGT TCGAGACGAT GCGCAAGCTC GACGCGAAGG ACCCGACGCC GTTGATGGCG CTCGCGCTGA TCAAGATCCA GCAGAAGAAA CTCGACGAGG CGACCGGCTA CCTGAAGCAG TACGTGCAGC TCGGCGACAA GCAGCCGAAC CTCGACGTCG GCCAGGGCTA CATCTACCTC GCGCAGATCG CGATCGACCA GAACAACGAC GCGCAGGCGT CGCAATGGCT CGACAAGGTC GACCAGACGA GCCAGCACTA CCTGCCCGCG CAGATCACGC GCGCGCAGCT GCTGCAGAAA CAGGGCAAGA CCGACGAGGC GCGCAAGGTG CTCGACAACC TGCCGATCTC GGATCCGCGC GACGCGGCCG TGGTGGCGCG CACCGATGCG TCGATCCTGT TCACCGCGAA GCGCTATCCG GAAGCGGAGG CGCGGCTCGG GCAGGCCGTC CAGGACTTCC CGGACGACCC CGACCTGCGC TACGACTACG CGATGGCGGC CGAAAAGACC GGCCACTACG CGACGATGGA AAAGCAGTTG CGCGAGCTGA TCCGTACGCA GCCCGACAAC CCGCAGGCCT ACAACGCGCT TGGCTATTCG CTCGCCGATC GCAACCAGCG CCTGCCCGAG GCAAGCAAGC TGATCGACAA GGCGATGGCG CTCGCGCCGA ACGACGCGTA CATCATGGAC AGCCTCGGCT GGGTGAAGTA CCGGATGGGC GACACGGCCG GCGCGACGAA GGTGCTGCAG CGTGCATACG AACTGCAGCC GAACGCCGAA ATCGGCGCGC ATCTCGGCGA AGTGCTGTGG AAGAGCGGCG CGCAGGACGA CGCGCGCAAC GCGTGGCGTG CCGCGCAGAA GCTCGAGCCC GACAACGAAA CGCTGGTGCA GACGCTGAAA CGCCTGCAGA TCAACGGCCT CTGA
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Protein sequence | MTLPSKLLQE RPAAVRGARA FPVRRALGAA LFAAWTLTAF PAHAQDPASD DAEPQGAFEH VMPDEQKNLP GVPLTSQIVY QVLAAEVALQ RNQPAPAYQT YLALARDTRD PRMAQRATEI ALGAQSPADA LSAANLWRQY APDSNRASQV DAALLVLAGK PADAQPMLAR ELARASGDTR GPAILALQAL LVRGPDRVGG LAVLKDMLKN DMNRPEAQLA IARQQLAVDD KDGAAQSLKQ ALQLRPDYLP AALMLSQMGP AERAAGIASF EKYVQQNPKS RDARLALSQL YLADDRLDDA QKQFETMRKL DAKDPTPLMA LALIKIQQKK LDEATGYLKQ YVQLGDKQPN LDVGQGYIYL AQIAIDQNND AQASQWLDKV DQTSQHYLPA QITRAQLLQK QGKTDEARKV LDNLPISDPR DAAVVARTDA SILFTAKRYP EAEARLGQAV QDFPDDPDLR YDYAMAAEKT GHYATMEKQL RELIRTQPDN PQAYNALGYS LADRNQRLPE ASKLIDKAMA LAPNDAYIMD SLGWVKYRMG DTAGATKVLQ RAYELQPNAE IGAHLGEVLW KSGAQDDARN AWRAAQKLEP DNETLVQTLK RLQINGL
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