| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2802 |
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| Symbol | |
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| ID | 6124464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 3122084 |
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| End bp | 3123589 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641639394 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_001766083 |
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| Protein GI | 170734136 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.402108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA GCCTTCAACT CCGCCTGTCG CAACATCTTG CGCTGACGCC TCAGCTGCAG
CAGTCGATCC GGCTCCTGCA GTTGTCGACG CTCGAATTGC AGCAGGAAGT CGCGATGGCC
GTCGCGCAGA ACCCGCTGCT CGAGAACGAC GACGAATGGA TCGCCAGCCC GCTGCGCGTC
GCGGCGGACG GATCGCTGAT CGCGCAGACG CCGCCCGCAC AGAACACCGA GCCGGCCGCG
ATGAACGGCA GCAGCACGTC CAGCGAGCGC GCCGAGCGCG ACGAGCCGGC CGGCGCCGAC
GAATACGACG GCTACGGGTC CGGTGACGGC AACGACGGCC CGCAGTGGAA TCTCGACGAA
TACGGCCGCT CGAGCGGTGC GTCCGACGAC GACGACCTGC CGCCGCTGCA GGTGCAGGAA
GCCGCGACGT CGCTGCGCGA TCATCTCTCG GCGCAGTTGC GCGTCACGCA GGCCGGCCCG
CGCGATCGCG CGCTCGTGAT GTTCCTGATC GAATCGCTCG ACGACGACGG CTACCTGACC
GCCACGCTCG ACGAAGTGCT CGCCGACCTG CCGCCCGAAC TGGAAATCGA CGGCGACGAA
CTGAATGCGG CGCTCGCGCT GCTGCACAGC TTCGACCCGG CCGGCGTCGG CGCGCGCTCG
GCCTCCGAAT GCCTGAAGCT GCAGCTGCTG CGTCTCGATC CGTCCCCCAC GCGCACGCTC
GCGCTCGAGA TCGTGTCGCA GCATCTCGAA CTGCTCGCCG CACGCGACTT CACACGGTTG
CGCAAGCACC TGAAGGCGAG CGACGACGCG CTGCGCGACG CGCACGCGCT GATCCGCTCG
CTGGAGCCGT TCCCCGGCGC CGCCTACGGC AAGGCCGAGG CCGACTACGT CGTGCCCGAC
ATCATCGTGA AGAAGGCCGG CCAGGGATGG CTCGCGGAGC TCAATCCGGA GGTCGTGCCG
CGCCTGCGGA TCAACAACCT GTACGCGAAC ATCCTGCGCA ACAGCCGCGG CGATCCGTCG
GCCGGATCGT TGAAGCAGCA GCTGCAGGAA GCGCGCTGGT TGATCAAGAA CATCCAGCAG
CGTTTCGACA CGATCCTGCG TGTCGCGCAG GCTATTGTCG AGCGTCAGAA GAATTTCTTT
GCGCACGGTG AAATTGCCAT GCGCCCCTTG GTTTTGCGGG AAATAGCTGA TACGCTGGGC
CTACACGAGT CGACTGTCAG CCGTGTGACA ACCGGGAAGT ACATGCTGAC CCCGTTCGGG
ACGCTTGAAT TTAAGTACTT CTTCGGATCT CACGTCTCGA CCGACACCGG TGGCGCCGCC
TCGTCGACCG CCATCCGAGC CCTCATCAAG CAACTGATAG GAGCTGAAGA CCCAAAATCG
CCACTTTCGG ACAGCCGCAT TGCCGAGCTG CTGGCAGAAC AGGGTTTCGT GGTCGCGCGC
CGCACGGTTG CGAAATATCG CGAAGCCCTC AAGATCCCGG CAGTGAATCT GCGCAAGTCT
CTTTAA
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| Protein sequence | MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVAMA VAQNPLLEND DEWIASPLRV
AADGSLIAQT PPAQNTEPAA MNGSSTSSER AERDEPAGAD EYDGYGSGDG NDGPQWNLDE
YGRSSGASDD DDLPPLQVQE AATSLRDHLS AQLRVTQAGP RDRALVMFLI ESLDDDGYLT
ATLDEVLADL PPELEIDGDE LNAALALLHS FDPAGVGARS ASECLKLQLL RLDPSPTRTL
ALEIVSQHLE LLAARDFTRL RKHLKASDDA LRDAHALIRS LEPFPGAAYG KAEADYVVPD
IIVKKAGQGW LAELNPEVVP RLRINNLYAN ILRNSRGDPS AGSLKQQLQE ARWLIKNIQQ
RFDTILRVAQ AIVERQKNFF AHGEIAMRPL VLREIADTLG LHESTVSRVT TGKYMLTPFG
TLEFKYFFGS HVSTDTGGAA SSTAIRALIK QLIGAEDPKS PLSDSRIAEL LAEQGFVVAR
RTVAKYREAL KIPAVNLRKS L
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