| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2752 |
|---|
| Symbol | aspS |
|---|
| ID | 6124415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 3069085 |
|---|
| End bp | 3070887 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641639345 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001766034 |
|---|
| Protein GI | 170734087 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.314882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGC GTACTGAATA CTGCGGTCTC GTGACCGAAC ACCTGCTGGG CCAAACCGTG
TCGCTGTGCG GCTGGGTGCA GCGCCGCCGC GATCACGGCG GTGTGATCTT CATCGACCTG
CGCGATCGTG AAGGCCTCGT GCAGGTGGTG TGCGACCCGG ATCGCGCCGA GATGTTCGCG
ACCGCCGAAG GCGTGCGCAA CGAGTTCTGC GTGCAGATCA AGGGCCTCGT GCGCAACCGT
CCGGAAGGCA CGGTCAACGC CGGCCTGAAG AGCGGCAAGA TCGAAGTGCT GTGCCACGAA
CTGAACGTGC TGAACGCGTC GGTCACGCCG CCGTTCCAGC TCGACGACGA CAACCTGTCG
GAAACGACGC GTCTCACGCA CCGCGTGCTC GACCTGCGTC GCCCGCAGAT GCAGCACAAC
CTGCGCCTGC GCTACCGCGT CGCGATCGAG GCGCGCAAGT ACCTCGACGA GCAGGGCTTC
ATCGACATCG AAACGCCGAT GCTGACGAAG AGCACGCCGG AAGGCGCGCG CGACTACCTC
GTGCCGTCGC GCGTGAACGC GGGCCAGTTC TTCGCGCTGC CGCAGTCGCC GCAGCTGTTC
AAGCAGCTGC TGATGGTCGC GAACTTCGAC CGTTACTACC AGATCACCAA GTGCTTCCGC
GACGAGGATC TCCGCGCCGA CCGTCAGCCG GAATTCACGC AGATCGACTG CGAGACGTCG
TTCCTCGGCG AGCAGGAAAT CCGTGACCTG TTCGAGGACA TGATCCGTCA CATCTTCAAG
ACGACGATCG ACGTCGAGCT CGACGCGAAA TTCCCGGTGA TGCCGTACTC GGAAGCGATG
GCGCGTTTCG GTTCGGACAA GCCGGACCTG CGCGTGCAGC TCGAATTCAC CGAGCTGACC
GACGCGATGA AGGACGTCGA CTTCAAGGTG TTCAGCACGC CGGCCAACGC GAAGGACGGC
CGGGTCGCGG CGCTGCGCGT GCCGAAGGGC GGCGAGCTGT CGCGCGGCGA CATCGACGGC
TACACGGAAT TCGTGCGCAT CTACGGCGCG AAGGGCCTCG CGTGGATCAA GGTCAACGAG
AAGGCGAAGG GCCGCGACGG CCTGCAAAGC CCGATCGTCA AGAACCTGCA CGACGCATCG
ATCGCCGCGA TCCTCGAGCG CACCGGCGCC GAAGACGGCG ACATCATCTT CTTCGCGGCC
GACCGCGCGA AGGTCGTCAA CGACAGCCTC GGCGCGCTGC GCCTGAAGAT CGGCCATTCG
GAATTCGGCA AGGCGAACGG TCTGGTCCAG GCCGGCTGGA AGCCGCTGTG GGTCGTCGAC
TTCCCGATGT TCGAATACGA CGACGAAGAT GCGCGCTACG TTGCCGCGCA CCACCCGTTC
ACGAGCCCGA AGGACGAGCA CCTCGAGTAT CTCGAGACCG ACCCGGGCCG CTGCCTCGCG
AAGGCCTACG ACATGGTGCT GAACGGCTGG GAAATCGGCG GCGGCTCGGT GCGTATCCAC
CGCGAGGAAG TGCAGAGCAA GGTGTTCCGC GCGCTGAAGA TCGGTGCGGA AGAAGCGCAG
TTGAAGTTCG GCTTCCTGCT GGACGCGCTG CAGTACGGCG CGCCGCCGCA CGGCGGTATC
GCATTCGGTC TCGACCGCAT CGTCACGATG ATGGCCGGTG CCGATTCGAT CCGCGACGTG
ATCGCGTTCC CGAAGACGCA GCGTGCACAG GATCTGCTCA CGCAGGCGCC GAGCCCGGTC
GACGAGCGTC AACTGCGCGA GCTGCACATC CGTCTGCGTC AGCCGGAGCA GCCGAAGGCG
TAA
|
|---|
| Protein sequence | MSMRTEYCGL VTEHLLGQTV SLCGWVQRRR DHGGVIFIDL RDREGLVQVV CDPDRAEMFA
TAEGVRNEFC VQIKGLVRNR PEGTVNAGLK SGKIEVLCHE LNVLNASVTP PFQLDDDNLS
ETTRLTHRVL DLRRPQMQHN LRLRYRVAIE ARKYLDEQGF IDIETPMLTK STPEGARDYL
VPSRVNAGQF FALPQSPQLF KQLLMVANFD RYYQITKCFR DEDLRADRQP EFTQIDCETS
FLGEQEIRDL FEDMIRHIFK TTIDVELDAK FPVMPYSEAM ARFGSDKPDL RVQLEFTELT
DAMKDVDFKV FSTPANAKDG RVAALRVPKG GELSRGDIDG YTEFVRIYGA KGLAWIKVNE
KAKGRDGLQS PIVKNLHDAS IAAILERTGA EDGDIIFFAA DRAKVVNDSL GALRLKIGHS
EFGKANGLVQ AGWKPLWVVD FPMFEYDDED ARYVAAHHPF TSPKDEHLEY LETDPGRCLA
KAYDMVLNGW EIGGGSVRIH REEVQSKVFR ALKIGAEEAQ LKFGFLLDAL QYGAPPHGGI
AFGLDRIVTM MAGADSIRDV IAFPKTQRAQ DLLTQAPSPV DERQLRELHI RLRQPEQPKA
|
|---|
| |