| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2636 |
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| Symbol | |
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| ID | 6124937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2935813 |
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| End bp | 2937336 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641639228 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001765918 |
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| Protein GI | 170733971 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAA AACACGCTTT GACTGCAATC GCAGTCGCGC TCTTTGCCAC GGGCTGCACG
ATGGCGCCGC ACTACAAGCG GCCCGACGCA CCCGTCGCGC AGGCGTACCC GGCCGGCGGC
GTCTACGCGA CGCAGCCGGG CGCGGCCGGC GCGCGCAGCG CGAACGGCCA GGCGGCGACT
GCCATCGGCT GGCGCGAGTT CTTCGTCGAT CCGCGCCTGC AGCGGCTGAT CGAAATCGCG
CTGAAGAACA ACCGCGACCT ACGCGTGTCG GTGCTGAACA TCGAGGCGGC GCGTGCGCAG
TACCAGATCA CGCGCGCGGG GCTGTTCCCG ACGCTCGACG GTACGGGCAC GGGCAGCATC
CAGCGTTTCC CGGCTGGTGT ATCGCAGACG GGCCAGCCGC TGATTTCGCG CACCTACAAC
GTCGGGCTGT CCGCGTCGTG GGAGCTCGAC CTGTTCGGCC GCGTGCAGAG CCTGAAGGAT
CAGGCGCTCG CGCAATACCT GTCGACTGCG TATGCGCGGC AGGCGTCGGA AATCTCGCTG
GTGTCGCAGG TGGCGGATCA ATACCTGACG CTGCTGTCGA CCGATGACCT GCTGAAGGTT
ACGGAAGACA CGCTGAAGAC CGCGCAGGCA TCGTACGACC TGACCAAGCT GCAGTTCGAC
AACGGTACGG GCTCGGAGCT CGAGCTGCGT CAGGCGCAGA CGGTGGTCGA GACGGCGCTC
GCGAACCAGC AGGCGCAGGC CCGTGCCCGC GCGCAGGCGC TGAACGCGCT GGTGCTGCTG
ATCGGCGAGC CGCTGCCGGA CGACCTGCCG GCGGGCATGC CGCTCGACGC GCAGAACCTG
CTGACGGACG TGCCGGCTGG CCTGCCGTCG GATCTGCTCA CGCGTCGTCC GGACGTGATG
CAGGCCGAGC AGACGCTGCT GGCCGCGAAC GCGAACATCG GCGCGGCGCG CGCGGCGTTC
TTCCCGAAGA TTTCGCTGAC GGGCGCGTTC GGCACCGCGA GCCCGACGCT GGGCGGCCTG
TTCAAGGCCG GTACCGCGGC ATGGTCGTTC GCGCCGAGCA TCGCGCTGCC GATCTTCGAG
GGTGGGCAGA ACATCGCGAA CCTCGATCTC GCGCACGTGC AGAAGCGCAT CGAGATCGCG
AACTACGAGA AGGCGATCCA GTCGGCATTC CGCGAAGTAT CGGACGGCCT CGCCGCACGC
GGCACGTACG ACCAGCAGAT CGCGGCGCTG GAGCGCAACG AGCACGCGCA GCAACGTCGC
TTCGACCTGT CGGACCTGCG TTACAAGAAC GGCGTCGACA GCTACCTGTC GGTGCTGACC
GCGCAGACGG ATCTGTACTC GGCACAGCAG TCGCTGATCA GCGCGCGTCT GGCACGCTGG
ACGAACCTGG TCGACCTGTA CCGCGCGCTC GGTGGCGGCT GGATTCAGCA CGCCGGCGAA
GCGCCGCGCG CGCCGGATGC ACCGGTCGAC TACGACAAGG CGGCTGTTCC GGCGCCCGCG
TCGGCAACGG CGACGAACGG GTAA
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| Protein sequence | MMQKHALTAI AVALFATGCT MAPHYKRPDA PVAQAYPAGG VYATQPGAAG ARSANGQAAT
AIGWREFFVD PRLQRLIEIA LKNNRDLRVS VLNIEAARAQ YQITRAGLFP TLDGTGTGSI
QRFPAGVSQT GQPLISRTYN VGLSASWELD LFGRVQSLKD QALAQYLSTA YARQASEISL
VSQVADQYLT LLSTDDLLKV TEDTLKTAQA SYDLTKLQFD NGTGSELELR QAQTVVETAL
ANQQAQARAR AQALNALVLL IGEPLPDDLP AGMPLDAQNL LTDVPAGLPS DLLTRRPDVM
QAEQTLLAAN ANIGAARAAF FPKISLTGAF GTASPTLGGL FKAGTAAWSF APSIALPIFE
GGQNIANLDL AHVQKRIEIA NYEKAIQSAF REVSDGLAAR GTYDQQIAAL ERNEHAQQRR
FDLSDLRYKN GVDSYLSVLT AQTDLYSAQQ SLISARLARW TNLVDLYRAL GGGWIQHAGE
APRAPDAPVD YDKAAVPAPA SATATNG
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