| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2556 |
|---|
| Symbol | |
|---|
| ID | 6124220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2854325 |
|---|
| End bp | 2855071 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641639149 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001765839 |
|---|
| Protein GI | 170733892 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000796144 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCAC CCACGGACGA CCGCTGGCAG GACCTGCGCC CCGACCCCGA CAACGATACG
CCGCTCTACC TGCAGCTCGC CCGCAAGCTC GGCGATGCGA TCCACGACAA CCGCTGGACG
GCCGGCGAAG CGCTGCCTTC CGAGCGTGTG TTGTCCGAAG CGCTCGGCGT GTCGCGCATC
ACCGCGCGCA AGGCGATCGC GCTGCTCGTC GAGCAAGGCC TGATCCGCCG TACGCAAGGC
GCGGGCAACT TCATCCAGCC GCGCTACGAA GATCCGCTGT CGCGACTGTC GAGCTTCAGC
GAGATGCTGG AGCGCCGCGG CTTCAAGCCC AGCTCGCAAT GGCTCGCGCG CGAAATCCAG
CCAGCCAACC GCGACGAAGT GATCCAGCTC GGCCTGTCGC CGGCCGCATC GGTTACGCGC
CTGAAACGCC TGCGTCTCGC CGACGGCATC GTGATGGCCG TCGAGAACTC GACGTTCCCC
GCGACGCTGA TTCCCGATCC ACAAGCGATC GCCGGTTCGC TGTACAGCTA TCTCGAAGCG
CGCGGCACGC CGATCGTGCG CGCGCTGCAG CATTTCCGCG CGGTGAACGC GACCGACGAG
ATCGCCGAGC AGATGGGCAT CGCCCCGCAT GACGCCCTGC TGCTGATCAC GCGGATCGGC
TATACGTCCG ACCAGCGCGC GATCGAACTG ACCGATACCT ACTGCCGCAA CGACTACTAC
GATTTCGTCG TCGAGCTGCG CAAGTAA
|
|---|
| Protein sequence | MKAPTDDRWQ DLRPDPDNDT PLYLQLARKL GDAIHDNRWT AGEALPSERV LSEALGVSRI
TARKAIALLV EQGLIRRTQG AGNFIQPRYE DPLSRLSSFS EMLERRGFKP SSQWLAREIQ
PANRDEVIQL GLSPAASVTR LKRLRLADGI VMAVENSTFP ATLIPDPQAI AGSLYSYLEA
RGTPIVRALQ HFRAVNATDE IAEQMGIAPH DALLLITRIG YTSDQRAIEL TDTYCRNDYY
DFVVELRK
|
|---|
| |