Gene Bcenmc03_2533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2533 
Symbol 
ID6124197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2823817 
End bp2825334 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content68% 
IMG OID641639126 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001765816 
Protein GI170733869 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.173747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATT TGCAGAGCCG CCTGCTGTCG CACCGGCTGG AATCGGTGAT TCGCGATTTC 
CACCAGCCGG TGATGATCTG GCAGGCGGCG ATCCTCATCG GTGCGCTGTG TTTCGCGTGG
GTGGCCGCGC GCTTCGTGCA CGGCCGGATC GATGCGCGGC GCCGGGCGGC CGGGCGTGCG
CCCGGCGCGG GCGCGCAAAG CCTGAAACGT GCGTTGTTTC CGCTGTTTGG CAGCGTGTTC
GTCGGCGGCG CGCAGCTCGC GTTCGACCCG TTCATGTCGA CGTCGCTGCT GTCGCTCGCG
CTCGTGCCGC TGTTCGGCAT CGGGCTGATC TACGTGCTGT TCTTCTTCGC GCGGCGCGTG
TTCGCGCGCG ACGGCCACAC GCACGCGTGG CTGTCGATCG TCGAGAAGAT CGTGTCGACC
GTCGTGTGGG CCGCGATGGT GATGACCGTG CTCGGTATCC AGCGCGACGT GCTGGGTTGG
CTCGACAGCG TGCAGTTCCG GGTCGCGACC GCGCACCTCA CGCTGCTGTC GGTGATCTCC
GGCGCGCTGT GGGTGTGCGT GACGCTGATG GTCGCGATGT GGCTCGGCTC GGTGCTCGAG
GATCGCCTGT CGCGCGCGAG CACGCTCGAC GCGAATCTGA AGGTCGTGCT GTCGCGGGTC
GGCCGCGCGC TGCTCGTGTT CGCGGCGATC CTGATCGGGC TGTCGCTGGT CGGCATCGAC
GTGACGGTGC TCGGCGTGTT CGGCGGCGCG GTGGGCGTCG GCCTCGGGTT CGGGCTGCAG
AAGATCGCCA GCAACTACGT GTCGGGCTTC ATCATCCTGC TCGACCGCTC GCTGCGCCTC
GGCGATGCGA TCAGCGTCGG CGGGCTGCAG GGCGTCGTCA CGCAGATCCG CACGCGCTAC
ACGGTCGTAC GCGGCCTCGA CGGCAACGAG ACGCTGATCC CGAACGAGAA GCTGATCACC
GACGTCGTGC AGAACCAGTC GTCGTACCTG ACGCGCGGCT ACGCGAAAGT CGCGGTGCAG
GTCGCGTACA CGAGCGACGT CGAGCAGGCA CTCGCGTTGC TCGCCGACGC CGCGAAGGAC
GTGCCGCGCG TGCTGGCCGA GCCGGCGCCG ACGCCGTACC TCGTGGGGTT CGGCGCGGAC
GGGATCGATC TGGAGCTGGG CTTCTGGATC GAGGATTCGG CGAAAGGGAC ATCGGGCGTG
CGCTCGAGCG TGAACCGCAA CATCTGGCGG CTGTTCAGCG AACACGGGAT CTCGATTCCG
TTTCCGCAGC GCGAGGTGCG CGTGGTCGGG CTGCCGGACG GCTTTCCCGC GGCGGCGGGC
GAGGCGGCCG GGCCCGATCC GGCGCTTGCC AATGGACGGG CGCGCACCGG CGGCGTAGCG
GCCACGGGCG GTCAATCGTA CCGATTCCGC GGTCGAAACC GGATCGCGGC CCTTTCCCAG
TCCGCGCATG GACCGCGCGG ATTGCGTCAG GGCAAGAAAA TATTCATTTT TTACAAAGAC
TTGGAACGGT TGAAGTAA
 
Protein sequence
MENLQSRLLS HRLESVIRDF HQPVMIWQAA ILIGALCFAW VAARFVHGRI DARRRAAGRA 
PGAGAQSLKR ALFPLFGSVF VGGAQLAFDP FMSTSLLSLA LVPLFGIGLI YVLFFFARRV
FARDGHTHAW LSIVEKIVST VVWAAMVMTV LGIQRDVLGW LDSVQFRVAT AHLTLLSVIS
GALWVCVTLM VAMWLGSVLE DRLSRASTLD ANLKVVLSRV GRALLVFAAI LIGLSLVGID
VTVLGVFGGA VGVGLGFGLQ KIASNYVSGF IILLDRSLRL GDAISVGGLQ GVVTQIRTRY
TVVRGLDGNE TLIPNEKLIT DVVQNQSSYL TRGYAKVAVQ VAYTSDVEQA LALLADAAKD
VPRVLAEPAP TPYLVGFGAD GIDLELGFWI EDSAKGTSGV RSSVNRNIWR LFSEHGISIP
FPQREVRVVG LPDGFPAAAG EAAGPDPALA NGRARTGGVA ATGGQSYRFR GRNRIAALSQ
SAHGPRGLRQ GKKIFIFYKD LERLK