Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2533 |
Symbol | |
ID | 6124197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2823817 |
End bp | 2825334 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641639126 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001765816 |
Protein GI | 170733869 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.173747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAATT TGCAGAGCCG CCTGCTGTCG CACCGGCTGG AATCGGTGAT TCGCGATTTC CACCAGCCGG TGATGATCTG GCAGGCGGCG ATCCTCATCG GTGCGCTGTG TTTCGCGTGG GTGGCCGCGC GCTTCGTGCA CGGCCGGATC GATGCGCGGC GCCGGGCGGC CGGGCGTGCG CCCGGCGCGG GCGCGCAAAG CCTGAAACGT GCGTTGTTTC CGCTGTTTGG CAGCGTGTTC GTCGGCGGCG CGCAGCTCGC GTTCGACCCG TTCATGTCGA CGTCGCTGCT GTCGCTCGCG CTCGTGCCGC TGTTCGGCAT CGGGCTGATC TACGTGCTGT TCTTCTTCGC GCGGCGCGTG TTCGCGCGCG ACGGCCACAC GCACGCGTGG CTGTCGATCG TCGAGAAGAT CGTGTCGACC GTCGTGTGGG CCGCGATGGT GATGACCGTG CTCGGTATCC AGCGCGACGT GCTGGGTTGG CTCGACAGCG TGCAGTTCCG GGTCGCGACC GCGCACCTCA CGCTGCTGTC GGTGATCTCC GGCGCGCTGT GGGTGTGCGT GACGCTGATG GTCGCGATGT GGCTCGGCTC GGTGCTCGAG GATCGCCTGT CGCGCGCGAG CACGCTCGAC GCGAATCTGA AGGTCGTGCT GTCGCGGGTC GGCCGCGCGC TGCTCGTGTT CGCGGCGATC CTGATCGGGC TGTCGCTGGT CGGCATCGAC GTGACGGTGC TCGGCGTGTT CGGCGGCGCG GTGGGCGTCG GCCTCGGGTT CGGGCTGCAG AAGATCGCCA GCAACTACGT GTCGGGCTTC ATCATCCTGC TCGACCGCTC GCTGCGCCTC GGCGATGCGA TCAGCGTCGG CGGGCTGCAG GGCGTCGTCA CGCAGATCCG CACGCGCTAC ACGGTCGTAC GCGGCCTCGA CGGCAACGAG ACGCTGATCC CGAACGAGAA GCTGATCACC GACGTCGTGC AGAACCAGTC GTCGTACCTG ACGCGCGGCT ACGCGAAAGT CGCGGTGCAG GTCGCGTACA CGAGCGACGT CGAGCAGGCA CTCGCGTTGC TCGCCGACGC CGCGAAGGAC GTGCCGCGCG TGCTGGCCGA GCCGGCGCCG ACGCCGTACC TCGTGGGGTT CGGCGCGGAC GGGATCGATC TGGAGCTGGG CTTCTGGATC GAGGATTCGG CGAAAGGGAC ATCGGGCGTG CGCTCGAGCG TGAACCGCAA CATCTGGCGG CTGTTCAGCG AACACGGGAT CTCGATTCCG TTTCCGCAGC GCGAGGTGCG CGTGGTCGGG CTGCCGGACG GCTTTCCCGC GGCGGCGGGC GAGGCGGCCG GGCCCGATCC GGCGCTTGCC AATGGACGGG CGCGCACCGG CGGCGTAGCG GCCACGGGCG GTCAATCGTA CCGATTCCGC GGTCGAAACC GGATCGCGGC CCTTTCCCAG TCCGCGCATG GACCGCGCGG ATTGCGTCAG GGCAAGAAAA TATTCATTTT TTACAAAGAC TTGGAACGGT TGAAGTAA
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Protein sequence | MENLQSRLLS HRLESVIRDF HQPVMIWQAA ILIGALCFAW VAARFVHGRI DARRRAAGRA PGAGAQSLKR ALFPLFGSVF VGGAQLAFDP FMSTSLLSLA LVPLFGIGLI YVLFFFARRV FARDGHTHAW LSIVEKIVST VVWAAMVMTV LGIQRDVLGW LDSVQFRVAT AHLTLLSVIS GALWVCVTLM VAMWLGSVLE DRLSRASTLD ANLKVVLSRV GRALLVFAAI LIGLSLVGID VTVLGVFGGA VGVGLGFGLQ KIASNYVSGF IILLDRSLRL GDAISVGGLQ GVVTQIRTRY TVVRGLDGNE TLIPNEKLIT DVVQNQSSYL TRGYAKVAVQ VAYTSDVEQA LALLADAAKD VPRVLAEPAP TPYLVGFGAD GIDLELGFWI EDSAKGTSGV RSSVNRNIWR LFSEHGISIP FPQREVRVVG LPDGFPAAAG EAAGPDPALA NGRARTGGVA ATGGQSYRFR GRNRIAALSQ SAHGPRGLRQ GKKIFIFYKD LERLK
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