| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2483 |
|---|
| Symbol | |
|---|
| ID | 6124936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2776283 |
|---|
| End bp | 2777497 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641639076 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001765766 |
|---|
| Protein GI | 170733819 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCATTAA CCGATACAGC CATCCGGAAC GCCAAGCCAG CCGACAAGCC CGTGCGCCTG
TTCGACGGAG GCGGCCTCTA TCTGGAAGTC GCCCCGAGCG GGGGCAAGTG GTGGCGCCTC
AAATACCGAT TTGGGGGCAA GGAAAAGCGC TACTCGCTCG GCGTCTACCC GGAAGTTACA
TTGGCGACCG CACGGAAGAA GCGCGACGAA GCCCGTGAAA AGCTCGCTGC CGGCATCGAT
CCGGGTAAAG CGAAGAAGGC GGAAAAAAGG GCCAGCCTGC TCGCGGCCGC CCATTCGTTT
GAGGTTGTCG CCCGTGGCTG GATGGCCGAG CGCAAGACGA CCGTGGAGCC AGCGCAGCAT
GCCAAGACGC TCGCCCGCAT GGAGAACGAT GTATTCCCAT GGCTCGGCAA GCGCCCTATC
GCTGAAATCG ACGCCCCGGA GATACTGGCC GTGCTGAAGC GCGTAGACGG GCGTGGAGCC
AGATTTACCG CCCATCGCAT CCGCAGCGAG ATTAGCCGGG TATTCCGCTA CGGCATCAAA
GAGGGGCACT GCAAGGCCGA TCCGGCCCGC GATCTGGTAG ATGCAATCCC GCCCGCGCAG
ACAACACACT TTGCCTCAAT CACTGAGCCG GAGAAAGTGG GCGAGATGCT TCGCGCGTTC
GACGGCTTCA CGGGCACGTT CCCGGTTCTC TGCGCGCTCA AGCTAGCCCC CATGCTGTTC
GTTAGGCCGG GCGAGTTGCG GAAGGCAGAA TGGGCGCAAT TCGACCTCGA CAAAGGCGAA
TGGCGCTATT TCGTCAACAA AACGAAAACG GATCACCTTG TTCCGCTGGC CGCGCAGGCT
GTCACGATTT TGCGCGAGCT TCACGCCCTG ACTGGCGAAG GCGTCTACGT GTTCCCTGGT
GCTCGCGACC GAAATCGGCC GATGAGCGAG GCCGCTATCA ATGCAGCCCT TCGTCGGCTC
GGCTACGACA CTCGCACCGA GATTACTGGT CACGGCTTCC GGGCAATGGC ACGGACGATC
CTGCATGAAG AGTTGGAGGA AAAGCCGGAA GTGATCGAGC ACCAACTAGC GCATACCGTC
CCTGACAGCC TGGGGCGCGC GTACAACCGA ACGAAATTCA TCAAGGCCCG ACGTTCGATG
ATGCAACAGT GGGCGGACTA CCTCGACAAG CTCAAAGCCG GTGCGGAAAT CATTCCGATC
GCGGCGGCAA GATAG
|
|---|
| Protein sequence | MPLTDTAIRN AKPADKPVRL FDGGGLYLEV APSGGKWWRL KYRFGGKEKR YSLGVYPEVT
LATARKKRDE AREKLAAGID PGKAKKAEKR ASLLAAAHSF EVVARGWMAE RKTTVEPAQH
AKTLARMEND VFPWLGKRPI AEIDAPEILA VLKRVDGRGA RFTAHRIRSE ISRVFRYGIK
EGHCKADPAR DLVDAIPPAQ TTHFASITEP EKVGEMLRAF DGFTGTFPVL CALKLAPMLF
VRPGELRKAE WAQFDLDKGE WRYFVNKTKT DHLVPLAAQA VTILRELHAL TGEGVYVFPG
ARDRNRPMSE AAINAALRRL GYDTRTEITG HGFRAMARTI LHEELEEKPE VIEHQLAHTV
PDSLGRAYNR TKFIKARRSM MQQWADYLDK LKAGAEIIPI AAAR
|
|---|
| |