| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2330 |
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| Symbol | |
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| ID | 6123994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2601699 |
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| End bp | 2603480 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638919 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001765613 |
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| Protein GI | 170733666 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.273025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAACCC AGAACACTCT TCGCAAACCG ATGGACGGCA CCGGCACCTC GCCGATGACG
GTCCTCAAGC GCCTGTGGCC GTACATCCGG CCGCTCATCG GCATCGTGGT GCTCGCCGTG
GTGACGATGG GCGTCGTCGC GGCCACCGAG GCCGGTATCC CGGCGCTGCT CAAGCCGCTG
CTCGACCACG GCTTCGGCTC GCACGGCAGC GACAGCGCGA AATGGTACGT GCCGATCGCG
GTAATCGGGC TCGCGCTCGT GCGCGGCGTC TCGCAGTACG CATCGAATTA CCTGCTCAAC
TACGTATCGA ACCGCATCCT GCTGCAGTTG CGGCTCGAGA TGTTCCAGCG GATGATCCAT
ACCGGCGCGT CGTTCTTCCA GCGCGAAACC GCGAGCACGG TGATCAACGC GATCGTGTTC
GAGGTCAACC AGATCCTGTC GGTGCTGACG GGCGTGATGG TCACGCTCGT GCGCGATTCG
CTGACGGTGA TCTTCCTGCT CGGCTACCTG TTCTACCTGA ACTGGCGGCT CACGCTGATC
GTCGCGGTGA TCCTGCCGGG CATCGGCTGG CTCGTCAGCA AGATCAACCG CCGGCTGCGC
CGCCTGAACC GCGAGCACCA GACGCTGACC AACGAGCTGT CGTACATCGT CGAGGAGACG
GTCGGCGGCT ACAAGGTCGT CAAGGTGCAC AACGGCGAAG CGTACGAGAT GGACCGCTTC
ACGACGATGA GCAAGCGCCT GCGCGGCTAC GCGATGCGCA TGACGATCTC GGGCGGCCTC
GCGCAGCCGC TCACGCAGTT CCTCGCGTCG ATCGCGCTCG CGGTCGTGAT CACGATCGCG
GTCGTGCAGT CGTCGAACGA CCAGACGACG GTCGGCGGTT TCGTCGCGTT CGTCACGTCG
ATGCTGCTGG TGATCTCGCC GCTCAAGCAC CTGATCGACG TCAACCAGCC GCTGCAGCGC
GGGATGACGG CCGCCGAGCT GATCTTCGGG CTGATCGACG AGCCGGCCGA GCCGCAGGGC
GGCGGGCGGC CGCTGTCGCA GGCGCGCGGC GAGATCGAGT TCCGCGCCGT GTCGTTCGAC
TACGGCGCGG CCGAACGGCC GACGCTCGAC CGTATCTCGT TCAAGGTCGC GCCGGGTGAA
ATGATCGCGC TGGCCGGCCC GTCCGGGAGC GGCAAGACGA CGCTCGTGAA CCTGCTGCCG
CGCTTCTTCG ACCCGACGGA CGGCACGATC CTGGTCGACG GCGTGCCGGT GTCCGACTAC
GACCTCCACG CGCTGCGCAG CCAGATGGCG ATGGTTAGCC AGGACGTCGT GCTGTTCAAC
GACACGATCG CCGCGAACGT CGCCTACGGG CAGACGCCCG ACCGCGCACG CGTGCAGGCC
GCGCTCGAGG CCGCGAACCT CGCCGATGCG GTCGCCGCGA TGCCCGACGG GCTCGATACG
CTGGTCGGCG GCAACGGGAT GCGGTTGTCC GGCGGCCAGC GCCAGCGGCT CGCGATTGCG
CGCGCGATCT ACAAGGACGC GCCGATCCTG ATCCTCGACG AAGCGACGTC GGCGCTCGAT
TCGGAGTCGG AGCGCCACGT GCAGGCCGCG CTCGAGCGGC TGATGGAAGG CCGCACGACG
CTGGTGATCG CGCACCGGCT GTCGACGATC GAGCGCGCGG ACCGCATCCT CGTGCTCGAG
GCCGGCAAGA TCGTCGAGGA GGGCAGCCAC GACGAACTGC TGCGCCACGG CGGCCTCTAC
GCGCACCTGC ACCGGATCCA GTACCAGCAG CAGGCGGCGT GA
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| Protein sequence | METQNTLRKP MDGTGTSPMT VLKRLWPYIR PLIGIVVLAV VTMGVVAATE AGIPALLKPL
LDHGFGSHGS DSAKWYVPIA VIGLALVRGV SQYASNYLLN YVSNRILLQL RLEMFQRMIH
TGASFFQRET ASTVINAIVF EVNQILSVLT GVMVTLVRDS LTVIFLLGYL FYLNWRLTLI
VAVILPGIGW LVSKINRRLR RLNREHQTLT NELSYIVEET VGGYKVVKVH NGEAYEMDRF
TTMSKRLRGY AMRMTISGGL AQPLTQFLAS IALAVVITIA VVQSSNDQTT VGGFVAFVTS
MLLVISPLKH LIDVNQPLQR GMTAAELIFG LIDEPAEPQG GGRPLSQARG EIEFRAVSFD
YGAAERPTLD RISFKVAPGE MIALAGPSGS GKTTLVNLLP RFFDPTDGTI LVDGVPVSDY
DLHALRSQMA MVSQDVVLFN DTIAANVAYG QTPDRARVQA ALEAANLADA VAAMPDGLDT
LVGGNGMRLS GGQRQRLAIA RAIYKDAPIL ILDEATSALD SESERHVQAA LERLMEGRTT
LVIAHRLSTI ERADRILVLE AGKIVEEGSH DELLRHGGLY AHLHRIQYQQ QAA
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