Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2315 |
Symbol | |
ID | 6123979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2588584 |
End bp | 2589363 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641638904 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001765598 |
Protein GI | 170733651 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.400056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG GCATCGAAGG AAAGACCGCG CTCGTGTGCG CGGCCAGCAA GGGCCTCGGG CGCGGCTGCG CGGAAGCGCT GGCCGCCGAG GGTGTGAACC TCGTGATCGT CGCGCGTACG CGCGACACGC TGGAGGAAAC CGCGGAAGAG ATCCGCGCCG GCGCGAACGT GTCGGTCACG GCGGTCGCGT GCGACATCAC GACGCCGGAC GGCCGCGCGG CCGCGCTCGC CGCGTGCCCG CAGCCGGACA TTCTCGTGAC GAATGCCGGC GGCCCGCCGC CCGGCGACTT CCGTGACTTC TCGCACGACG ACTGGATTCG CGCGCTCGAG TCGAACATGC TGACGCCGAT CGAGCTGATC CGCGCGACTC TCGACGGGAT GATCGGCCGC GGCTTCGGCC GGATCGTCAA CATCACGAGT TCGGCCGTGA AGGCGCCGAT CGACGTGCTC GCGCTGTCGA ACGGCGCGCG CTCGGGGCTG ACCGGCTTCG TCGCGGGGCT GTCGCGCAAG GTCGCGGGGC AGGGCGTGAC GATCAACAAC CTGCTGCCGG GGCTGTTCGA TACCGACCGG ATCGCGACCA CGCTCGCCGC GTCGGCGCAG GCGCAGGGCG TGACGGTCGA CGAGATGCGC GCGCGACGCA CCAGGGACAT CCCGGCCGGG CGCCTCGGCA CGCGCGCCGA GTTCGGCGCG GCCTGTGCGT TCCTGTGCAG CGTGCATGCC GGCTACATCA CCGGGCAGAA CTGGCTGCTC GACGGCGGCG CGTATCCGGG TACGTTCTGA
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Protein sequence | MDLGIEGKTA LVCAASKGLG RGCAEALAAE GVNLVIVART RDTLEETAEE IRAGANVSVT AVACDITTPD GRAAALAACP QPDILVTNAG GPPPGDFRDF SHDDWIRALE SNMLTPIELI RATLDGMIGR GFGRIVNITS SAVKAPIDVL ALSNGARSGL TGFVAGLSRK VAGQGVTINN LLPGLFDTDR IATTLAASAQ AQGVTVDEMR ARRTRDIPAG RLGTRAEFGA ACAFLCSVHA GYITGQNWLL DGGAYPGTF
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