| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2225 |
|---|
| Symbol | |
|---|
| ID | 6123889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2493195 |
|---|
| End bp | 2493623 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641638808 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001765508 |
|---|
| Protein GI | 170733561 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.361252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGA ACACCGGTTT CAGCGACGAT GACGACGATG CCGTGATGAG CGAGATCAAC
ATGACGCCGC TCGTCGACGT CATGCTCGTA CTCCTGATCA TTTTTCTCGT GACGATCCCG
GCGATGCAGC ATGCGGTGAA GATCGACCTG CCGCACGCCA GCAGCCAGCC CGTCGACGAA
AAGCCGCAGA CCGTCGACGT CGCGATCCAG GGCGACGGCA CGATCCTGTG GGACGACCAC
ACGGTCACGC GCGAACAGCT GCAGGCACGC ATCGCGGAAG CCGCGAAGCG CACGCCGCAG
CCGGAGCTGC ATCTGCGCGC GGATCGCAAG GTTGCGTACG AGCACGTCGC GGAAGTGATG
TCGGATGCGC AGGCAGGCGG GCTGACGAAG CTCGGCTTCG TGACGGAGCC GGGCGCAAAA
GCAAAGTAA
|
|---|
| Protein sequence | MAMNTGFSDD DDDAVMSEIN MTPLVDVMLV LLIIFLVTIP AMQHAVKIDL PHASSQPVDE
KPQTVDVAIQ GDGTILWDDH TVTREQLQAR IAEAAKRTPQ PELHLRADRK VAYEHVAEVM
SDAQAGGLTK LGFVTEPGAK AK
|
|---|
| |