Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2116 |
Symbol | |
ID | 6123780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2354931 |
End bp | 2355593 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638696 |
Product | peptidase M50 |
Protein accession | YP_001765399 |
Protein GI | 170733452 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00340207 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATGCTT CCCTGATACA GACCATCGCC GTCTACGCGC TGCCCGTGAT CTTCGCGATC ACGCTGCACG AGGCCGCGCA TGGCTACGCC GCGCGCCTGC TCGGCGACAA CACCGCCTAC GCGATGGGGC GCGTGTCGTT CAATCCGATG CGCCACATCG ATCCGCTCGG CACGATCGCG ATCCCGCTCG CGATGTACTT CCTGACCGGC GGCGCATTCC TGTTCGGCTA TGCGAAGCCG GTGCCGGTGT CGTTCGGCAA CCTGCGCAAT CCGCGCTGGG GCAGCCTGTG GGTCGCGCTC GCGGGCCCTG CCTGCAACTT CGTGCAGGCG CTCGTCTGGG GCCTGCTGAC CCTGGTGCTG CCGGCCGTCG GCGTCGACGA GCCGTTCTTC ACGCGGATGG CGTTCGCCGG CGTCAGCGCG AACCTCGTGC TCGGCGTGCT GAACCTGTTT CCGCTGCCGC CGCTCGACGG CGGCCGCATC CTGGCGGCGC TGCTGCCGAC CAGGCAATCG ATCGCGCTGT CGCGCATCGA GCCGTACGGT TTCATCATCG TCCTCGTGCT CGTCACGACG GGCGTGCTGA CGAACTTCTG GCTGCGTCCG CTCGTCAACG TCGGCTACGC CGTCCTGAGC GCCATCCTGT CTCCCTTCGC CTCGCTTTTC TAA
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Protein sequence | MDASLIQTIA VYALPVIFAI TLHEAAHGYA ARLLGDNTAY AMGRVSFNPM RHIDPLGTIA IPLAMYFLTG GAFLFGYAKP VPVSFGNLRN PRWGSLWVAL AGPACNFVQA LVWGLLTLVL PAVGVDEPFF TRMAFAGVSA NLVLGVLNLF PLPPLDGGRI LAALLPTRQS IALSRIEPYG FIIVLVLVTT GVLTNFWLRP LVNVGYAVLS AILSPFASLF
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