Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2044 |
Symbol | |
ID | 6123708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2269328 |
End bp | 2271403 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638616 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_001765327 |
Protein GI | 170733380 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAA CCCAAGCCGA ACCGCCAGCC AGCCAGCCCG ACGCGCGCGC CGCGTGGCTG CGCGACCAAC TCGAGCGGGC GAACCACGCC TATTACGTGC TCGACCAGCC GGATCTGCCC GACGCCGAAT ACGACCGGCT GTTCCGCGAG CTGCAGCAGC TCGAAACCGA CCATCCCGAA CTCGTGACAC CCGATTCGCC GACGCAGCGC GTCGGCGGCG AAGCGGCCGG CGGTTTCACG CCGGTCGTCC ACGATGCGCC GATGCTGTCG CTGAACAACG GCTTCGCCGA CGAGGACATC GTTGCGTTCG ACAAGCGCGT CGCCGACGCG CTCGCCAAGA CGACCGATCT CGCCGGCTCG GTGACCGACC CCGTCGAATA CGCGTGCGAA CTGAAGTTCG ACGGCCTGGC GATCTCGCTG CGCTACGAGC AAGGCGTGTT CGTGCAGGCC GCGACGCGCG GCGACGGGAC GACGGGCGAG GACGTGACCG AGAACGTGCG CACGATCCGC TCGATTCCGC TGAAGCTGAA GGGCAAGCAC GTGCCGGCGG TGCTCGACGT ACGCGGCGAG GTGCTGATGT TCAAGCGCGA TTTCGCACGC CTGAACGAAC GCCAGCGCGC GGCCGAGCAG CGCGAATTCG CGAACCCGCG CAACGCGGCG GCCGGCAGCC TGCGCCAGCT CGACTCGAAA ATCACCGCGC AGCGGCCGCT GTCGTTCTTC GCGTACGGGA TCGGCGTGCT CGACGGGATG CCGATGCCCG ACACGCACAG CGCGCTGCTC GACTGGTACG AGTCGCTCGG CCTGCCGGTG AACCGCGAGC GCGCGGTCGT GCACGGCGCC GAAGGCTTGC TCGACTTCTT CCGCAAGGTC GGCGAGAAGC GCGAGTCGCT GCCGTACGAC ATCGACGGCG TCGTCTACAA GGTCAACCGG CGCGACGAGC AGGAGCGGCT CGGCTTCGTG TCGCGTGCGC CGCGCTTCGC GCTCGCGCAC AAGTTCCCCG CGCAGGAAGC GCTGACGAAG CTCGTCGCGA TCGACGTGCA GGTCGGCCGC ACCGGTGCGA TCACGCCGGT CGCGCGTCTC GAGCCGGTGT TCGTCGGCGG CGCGACCGTG ACCAATGCGA CGCTGCACAA CGAGGACGAG GTGCGCCGCA AGGACATCCG GATCGGCGAC ACCGTGATCG TGCGCCGCGC GGGCGACGTG ATTCCGGAAG TCGTCGGCGC GCTGCTCGAC CGGCGCCCGG CGGATGCGGC CGAATTCGTG ATGCCGACCG AATGCCCGGT GTGCGGCTCG AAGATCGAGC GCCTGCCGGA CGAGGCGATC GCGCGCTGCA CGGGCGGGCT GTTCTGCCCG GCGCAGCGCA AGCAGGCGCT GTGGCATTTC GCGCAACGCC GCGCGCTCGA CATCGATGGC CTCGGCGAGA AGATCATCGA CCAGCTCGTC GAGCTGAATC TCGTGCGCAC GCCGGCCGAC CTGTTCAATC TGGGCTTCGC GACGCTGGCC GAACTCGACC GGTTCGCCGA GAAGTCCGCG CAGAACCTGA TCGATTCGCT CGAGAAGGCC AAGCATACGA CGCTCGCGCG CTTCATCTAC GGGCTCGGTA TCCGCCATGT CGGCGAATCG ACCGCGAAGG ATCTCGCGAA GCATTTCGGC TCGCTGACGC CGATCATGGA CGCGTCGATC GAGGAACTGC TCGAAGTCAA CGACGTCGGG CCGATCGTGG CCGAGTCGCT TCACCAGTTC TTCGCGGAGG AGCACAACCG CACGGTCATC GAGCAGTTGC GCGCGCCGGG CAAGGTCACG TGGCCGGAAG GGCCGCCCGC GCCGAAGGCG CCGCAGGGCG TGCTGGCCGG CAAGACGGTC GTGCTGACGG GCACGCTGCC GAATCTCACG CGCGATGCGG CGAAGGAGAT GCTCGAAGCG GCCGGCGCCA AGGTGGCCGG CTCGGTATCG AAGAAGACGG ATTACGTGGT CGCGGGCGCC GAAGCCGGCA GCAAGCTCGC GAAGGCCGAG GAACTCGGCA TCCCCGTGCT GGACGAAGAC GGTCTGCACC AACTCCTGGA GGGCAATACG CCATGA
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Protein sequence | MARTQAEPPA SQPDARAAWL RDQLERANHA YYVLDQPDLP DAEYDRLFRE LQQLETDHPE LVTPDSPTQR VGGEAAGGFT PVVHDAPMLS LNNGFADEDI VAFDKRVADA LAKTTDLAGS VTDPVEYACE LKFDGLAISL RYEQGVFVQA ATRGDGTTGE DVTENVRTIR SIPLKLKGKH VPAVLDVRGE VLMFKRDFAR LNERQRAAEQ REFANPRNAA AGSLRQLDSK ITAQRPLSFF AYGIGVLDGM PMPDTHSALL DWYESLGLPV NRERAVVHGA EGLLDFFRKV GEKRESLPYD IDGVVYKVNR RDEQERLGFV SRAPRFALAH KFPAQEALTK LVAIDVQVGR TGAITPVARL EPVFVGGATV TNATLHNEDE VRRKDIRIGD TVIVRRAGDV IPEVVGALLD RRPADAAEFV MPTECPVCGS KIERLPDEAI ARCTGGLFCP AQRKQALWHF AQRRALDIDG LGEKIIDQLV ELNLVRTPAD LFNLGFATLA ELDRFAEKSA QNLIDSLEKA KHTTLARFIY GLGIRHVGES TAKDLAKHFG SLTPIMDASI EELLEVNDVG PIVAESLHQF FAEEHNRTVI EQLRAPGKVT WPEGPPAPKA PQGVLAGKTV VLTGTLPNLT RDAAKEMLEA AGAKVAGSVS KKTDYVVAGA EAGSKLAKAE ELGIPVLDED GLHQLLEGNT P
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