Gene Bcenmc03_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2025 
SymbolrnhB 
ID6123689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2248070 
End bp2248714 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID641638597 
Productribonuclease HII 
Protein accessionYP_001765308 
Protein GI170733361 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.179353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG TCCGTGCACC ACGCCGCCGC GCGTCGGGTG ACGTGCAGGG CGGTTTCGAC 
TTCAGCCGTC CGGACGAGAT CGTTTGCGGC GTCGACGAAG CCGGCCGCGG CCCGCTCGCG
GGGCCGGTGG TGGCCGCCGC GGTGATCCTC GATCCGGCGC AGCCGATCGA CGGGCTCGAC
GATTCGAAAG TGCTGTCCGC GAAGAAGCGC GACGCGCTGT ACGACCTGAT CGTCACGCGT
TCGCACGCGT ATTGCGTCGC GTCGGCGAGT GTCGACGAGA TCGATACGCT GAATATCCTG
CATGCGACGA TGCTCGCGAT GAAGCGGGCC GTCGAAGGCC TGTCGGTACT GCCGACGCTC
GCGCAGATCG ACGGCAACCG CTGCCCGACG CTGAGCGTGC GTGCCGAGGC GATCGTCAGT
GGCGACGCGC TCGTGCCGAG CATCTCGGCC GCATCGATCC TCGCGAAGGT CACGCGCGAC
CGGATGCTGG TCGACCTGCA TGAACGCTTC CCGGTGTACG GCTTCAACGT GCATGCGGGC
TACGGCACCG CGAAACACCT TGCCGCACTC CGCGAGCACG GCCCGTGCGA AGCGCATCGG
CGCTCGTTCG CGCCGGTTCG TGCGGCGCTT GACCTGATTC GATGA
 
Protein sequence
MTAVRAPRRR ASGDVQGGFD FSRPDEIVCG VDEAGRGPLA GPVVAAAVIL DPAQPIDGLD 
DSKVLSAKKR DALYDLIVTR SHAYCVASAS VDEIDTLNIL HATMLAMKRA VEGLSVLPTL
AQIDGNRCPT LSVRAEAIVS GDALVPSISA ASILAKVTRD RMLVDLHERF PVYGFNVHAG
YGTAKHLAAL REHGPCEAHR RSFAPVRAAL DLIR