Gene Bcenmc03_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2007 
Symbol 
ID6123671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2228948 
End bp2229586 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID641638579 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_001765290 
Protein GI170733343 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC CGAATTCGAC CATGCAAACC GTCGCGGTAC TGGACTTCGA AACAACCGGC 
CTGTCGCCGA ATCTGGGCGA CCGTGCAACC GAAATTGCCG TCATCCTGCT GCGCGACGGG
CAGGTCGTCG ACCGCTTCCA GAGCTTGATG AATGCCGGCC GACGCATCCC GTCCGATGTC
GTTGCGCTCA CCGGCATCAC GAACGACATG ATCGCGACGG CGCCGCCGGC GTCCGAAGTC
ATGAAGGAAG CGGCGGCGTT CGTCGGCAAA CATGCGGTCG TGGCCCACAA TGCCGGTTTC
GACAAACGCT TCTGGCAGTC GGAACTCGGG ATGCTCGGCA TGTCGGCCGA CCATGCGTTT
GCGTGCACGA TGCTGGTGGC GAGACGAATC TACCCGGACG CGCGGAGTCA CCGCCTGTCG
AGCCTCGCCG AGATGCTGCG GCTACCGCAA ACGGGCCGTG CGCACCGCGC GATGGTCGAT
GCGGAGATGG CCGGGCACCT GTGGTGCCGG TTGCAGCAGG ATATTTCGCG GACTTATGGG
CTGGATCGGA TCGATCACGC GTTGATGTCG CAGGTTCAGG TGACGACCAA GGCGAAGGTG
CCGATGTATT TGCGTTCGCT CGTGCGTGTG CATGCGTGA
 
Protein sequence
MTPPNSTMQT VAVLDFETTG LSPNLGDRAT EIAVILLRDG QVVDRFQSLM NAGRRIPSDV 
VALTGITNDM IATAPPASEV MKEAAAFVGK HAVVAHNAGF DKRFWQSELG MLGMSADHAF
ACTMLVARRI YPDARSHRLS SLAEMLRLPQ TGRAHRAMVD AEMAGHLWCR LQQDISRTYG
LDRIDHALMS QVQVTTKAKV PMYLRSLVRV HA