Gene Bcenmc03_1975 details

Gene Information

• Locus tag: Bcenmc03_1975
• Symbol: mscL
• ID: 6123639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia MC0-3
• Kingdom: Bacteria
• Replicon accession: NC_010508
• Strand: +
• Start bp: 2200127
• End bp: 2200558
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641638547
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001765258
• Protein GI: 170733311
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.0443039
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATCA TCAAGGAATT CAAGGAGTTC GCCGTCAAGG GCAACGTGAT GGATCTCGCC 
GTCGGCGTGA TCATCGGCGG CGCGTTCTCG AAGATCGTCG ACTCGGTCGT GAAGGACCTC 
ATCATGCCGG TCATCGGTGT GCTGACCGGC GGTCTGGATT TCTCGAACAA GTTCGTTCTG 
CTCGGCACCA TCCCCCCGTC GTTCAAGGGT AATCCCGATT CGTTCAAGGA CCTGCAGGCC 
GCGGGCGTCG CCGCATTCGG CTACGGATCG TTCATCACGG TGGCGATCAA TTTCGTGATC 
CTTGCGTTCA TCATTTTCCT GATGGTGAAA TTCATCAACA AGCTGCGCAA GCCGGAAGAA 
GCCGCACCGG CCGCGACGCC GGAAGACATC GTGCTGCTGC GCGAGATCCG CGATTCGCTC 
AAGCAGCGCT GA 

 

Protein sequence

MSIIKEFKEF AVKGNVMDLA VGVIIGGAFS KIVDSVVKDL IMPVIGVLTG GLDFSNKFVL 
LGTIPPSFKG NPDSFKDLQA AGVAAFGYGS FITVAINFVI LAFIIFLMVK FINKLRKPEE 
AAPAATPEDI VLLREIRDSL KQR