| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1956 |
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| Symbol | |
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| ID | 6123620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2176518 |
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| End bp | 2177807 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641638527 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001765239 |
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| Protein GI | 170733292 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00339995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTGA GCGATGAAGG CTGTTGCCCG CGCCATGAAT CCGGGGACAC GGGGTCATCG
CTGCTGATGG GGGCGCTGAC GAGGGAGAAC CTGAAGCAGG CGTTCAAACG GGTACGGGCC
AACAAGGGAG CCGCTGGCGT GGACGGTCTG GATATTGACC AGACGTCGCG CCATCTGGTG
ACGGCGTGGC CCGCGATCCG TGAACAGTTG CTGAAGGGGA CGTACCGGCC CAGTCCGGTA
CGGCGGGTGA CGATCCCGAA ACCGGACGGA GGCGAGCGCG AGCTTGGCAT CCCGACGGTG
ACGGACCGGC TGATCCAGCA GGCGCTGCTG CAGGTGCTGC AACCGGTTCT GGACCCTGGC
TTCAGCGAGC ACAGCTACGG CTTCCGGCCT GGACGGCGTG CGCACGATGC GGTGCTTGCC
GCGCAGTCGT ACGTGCAGTC GGGTCGGCGA ATCGTGGTGG ATGTTGATCT GGAGAAGTTC
TTCGACCGGG TCAACCACGA CATCCTGATC GACCGACTGC AGAAACGTAT TGGGGACGCC
AGCGTGATCC GGCTGATCCG GGCGTATCTG AACAGCGGCA TCATGGATGG CGGCGTGGTT
CAGCAGCGCG AACAGGGCAC GCCACAGGGC GGGCCGCTAT CGCCGTTGCT GGCCAACGTG
TTGCTCGATG AGGTGGACAA GGAACTGGAG CGGCGAGGCC ACTGCTTCGC GCGCTATGCC
GACGATGCGA ATGTCTATGT TCGTAGCCGC CGTGCTGGCG AGCGGGTGAT GGCGCTGCTG
CGTCGTCTGT ATGGGCAACT GCGGTTGAAG GTCAACGAGA CCAAAAGCGC AGTCGCCAGT
GTGTTCGGTC GCAAGTTTCT GGGCTACAGC CTATGGGTAG CGTCCGGCGG TGTCATCAAG
CGCAAGGTGG CGGCCAGAGC GCTGCTGGCG TTCAAACGCC GCATTCGTGA ACTGACCGGC
CGTAGCGGCG GGCGCAGCAT GAAGGACGTG GTGGAACGGT TACGGCCCTA TGTATTGGGC
TGGAAGGCGT ACTTCCGGAT GGCGCAGACG CCACGAGTCT GGCTGGATCT GGACAAGTGG
ATGCGTCATC GGCTGCGTGT CATCCAGCTC AAACACTGGC GCCGCGGTCC GACCATCTAC
CGGGAACTGC GTGCGCTGGG CGCACCGTCC GCTGTGGCGC AACAGGTGGC GGCGAATAGC
TGCCGCTGGT GGCGTAACAG CGGCAAGCTC CTGAATAGCG TATTGACCCT CGCGTACTTC
GATCGGCTGG GTGTGCCCCG ACTCTCATAA
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| Protein sequence | MPVSDEGCCP RHESGDTGSS LLMGALTREN LKQAFKRVRA NKGAAGVDGL DIDQTSRHLV
TAWPAIREQL LKGTYRPSPV RRVTIPKPDG GERELGIPTV TDRLIQQALL QVLQPVLDPG
FSEHSYGFRP GRRAHDAVLA AQSYVQSGRR IVVDVDLEKF FDRVNHDILI DRLQKRIGDA
SVIRLIRAYL NSGIMDGGVV QQREQGTPQG GPLSPLLANV LLDEVDKELE RRGHCFARYA
DDANVYVRSR RAGERVMALL RRLYGQLRLK VNETKSAVAS VFGRKFLGYS LWVASGGVIK
RKVAARALLA FKRRIRELTG RSGGRSMKDV VERLRPYVLG WKAYFRMAQT PRVWLDLDKW
MRHRLRVIQL KHWRRGPTIY RELRALGAPS AVAQQVAANS CRWWRNSGKL LNSVLTLAYF
DRLGVPRLS
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