Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1935 |
Symbol | |
ID | 6123599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2146968 |
End bp | 2147750 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641638504 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001765218 |
Protein GI | 170733271 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.211427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGA AATCCCCCCG CCTGTGGGTC GCGGCGGCTG CTTTTGCAGC GGCACCGGCA TTCGCCCAGA ACATCGCCGT CGTCAACGGC ACGCCGATTC CGAAGTCGCG CGCCGATGCG ATGGTCGCGC AGCTCGTCCA GCAAGGCCAG ACCGACGGCC CACAACTGCA GCAGGCCGTG CGCCAGGAAC TGGTGAACCG CGAAATCCTG ATGCAGGAAG CGATCCGCGA AGGCATCCCG AATCGTCCGG ACGTGAAGGC GCAAGTCGCC GTCGCGCAGC AGACCGTCGT GCTGCGCTCG ATGATCGAGA GCTTCCTGAA GAAGAACCAG CCGACCGACG CCGAAGTGAA GGCGCGCTAC GACGAACTCG TCAAGGGCGT GGGCGGCAAC CGCGAGTACC ACCTGCACCA CATCCTCGTC GACAACGAGC AGCAGGCGAA GGACCTGATC GCGAAGATCA AGGGCGGCGC GAAGTTCGAG GATCTCGCGA AGCAATACTC GAAGGACCCG GGTTCGGGCA AGAACGGCGG CGATCTCGAC TGGTCCGACC CGAAGGCGTA CGTGCCGGAA TTCGCGGCAG CCGCGCAGAA GCTGCAGAAA GGCCAGATGA CCGACGCGCC GGTGAAGACG CAGTTCGGCT GGCACATCAT CCGCGTCGAC GACATCCGCG ACATCGCGCC GCCGCCGTTC GACCAGGTGA AGGCGCAGAT CGCGCAGCAG CTCGTGCAGC AGAAGCTGCA GGCGTTCGAG GAAGGTCTGC GTCAGCAGGC GAAGATCCAG TAA
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Protein sequence | MILKSPRLWV AAAAFAAAPA FAQNIAVVNG TPIPKSRADA MVAQLVQQGQ TDGPQLQQAV RQELVNREIL MQEAIREGIP NRPDVKAQVA VAQQTVVLRS MIESFLKKNQ PTDAEVKARY DELVKGVGGN REYHLHHILV DNEQQAKDLI AKIKGGAKFE DLAKQYSKDP GSGKNGGDLD WSDPKAYVPE FAAAAQKLQK GQMTDAPVKT QFGWHIIRVD DIRDIAPPPF DQVKAQIAQQ LVQQKLQAFE EGLRQQAKIQ
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