Gene Bcenmc03_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1905 
Symbol 
ID6123569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2114970 
End bp2115992 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content72% 
IMG OID641638474 
ProductL-asparaginase, type II 
Protein accessionYP_001765188 
Protein GI170733241 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00520] L-asparaginases, type II 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000217284 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACAC CGAACACCGC ATCCCCTTCG TCCGCGCCGG CGCTGCCGCG CATCGCCGTA 
CTCGCCACCG GCGGCACGAT CGCCGGCGCC GCGCCCGACG CGGCCAGCAC GGCCGGCTAC
CAGGCCGGCG CGCTCGGCGT CAATTTCCTG GTCGACGCCG TACCGGCGCT CGCGTCGGTC
GCGCGTATCG ACGCGGAGCA GGTCGCCAGC ATCGACAGCA AGGATCTCGC GCTGCCGCTG
TGGAACACGC TCGCCGCGCG GATCGACGCG CTGATGGCCG ACCCGGCGAT CGACGGCATC
GTGATCACCC ACGGCACCGA TACGCTCGAG GAAACCGCGT ATGCACTGCA TCTGGTCGTC
CGGGGCGACA AGCCGGTCGT GCTGACGGCC GCGATGCGGC CGGCGACCGC GCTGTCGTCC
GACGGCCCGC TGAACCTGCT GAACGCGGTG ACGGTGGCCG CCCATCCGGC CGCGCGCGGG
CAGGGCGTGC TGGTCGCGTT CAACAACCGA ATCCACGGCG CGCGCGACGT CGTGAAGACG
AGCACCTATG CGGTCGACGC GTTCCAGTCG CCGGAGCTCG GCGCACTCGG CTGGGTGCAG
GACGGCCGCG TCGAATTCGC CCGCCGTGTC ACGCGCACGC GCGACACGCA GCTGGCGATC
GCGCCGACTT GGCCGTCGGT CGAAGTCGTC GCGAGCTATG CGGGCGTGAC GCGCACGGCC
GTCGACGCGC TCGTCGCGGC CGGCGTGCGC GGCCTCGTCG TCGCGGGCAC CGGCAACGGG
TCGATCCATG CGACGCTGCA GACGGCGCTC GCCGATGCGG TGAACGCGGG CGTGGCGGTG
GTTCGTGCGT CGCGCGTCGG TTCGGGGCAC GTGATGCGCA ACGGCGCCGC GAGCGACGAT
GCGCTCGGTT TCGTGAGCGC GGGCTCGCTG CACCCGTTCA AGGCGCGCGT GTTGCTGATG
CTCGCGCTCG CGAACGGCAT GCACGATCGC GACGCACTGC AGCGCGCATT CGACACGCTG
TGA
 
Protein sequence
MNTPNTASPS SAPALPRIAV LATGGTIAGA APDAASTAGY QAGALGVNFL VDAVPALASV 
ARIDAEQVAS IDSKDLALPL WNTLAARIDA LMADPAIDGI VITHGTDTLE ETAYALHLVV
RGDKPVVLTA AMRPATALSS DGPLNLLNAV TVAAHPAARG QGVLVAFNNR IHGARDVVKT
STYAVDAFQS PELGALGWVQ DGRVEFARRV TRTRDTQLAI APTWPSVEVV ASYAGVTRTA
VDALVAAGVR GLVVAGTGNG SIHATLQTAL ADAVNAGVAV VRASRVGSGH VMRNGAASDD
ALGFVSAGSL HPFKARVLLM LALANGMHDR DALQRAFDTL