Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1817 |
Symbol | |
ID | 6123481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2018808 |
End bp | 2019890 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641638386 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001765100 |
Protein GI | 170733153 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.294999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCGC CCGTCGTGCC GTCCGCGGCG CTCGACGAGG CGCCGCGCGT CGTCGAAGTG CCGCTGTCGC TCGCGGGTGA ACGCCTCGAC AAGGCGCTTG CCCAACTGTT CCCCGAATTC TCGCGCAGCC GCCTGCAGAG CTGGATCGAG GCGCAGCGCG TGCTCGTCGA CGGCGCGCCG GCGAAGATCC GTCAGCCGGT GCCGCTCGGC GCGAAGATCG CGCTCGTGCC CGATCTGTTG CCCGAGCAGC TCGCGTTCAC GCCGGAGCCC GTGCCGCTCG ACGTGATCTA CGAGGACGAC GCGCTCGTCG TCATCAACAA GCCGGCCGGC CTCGTCGTGC ATCCGGCCGC CGGCAACTGG AGCGGCACGA TCCTCAACGG TCTGCTGCAT CGCTACGGCG ACGCGGCGGC CGGCCTGCCG CGCGCAGGGA TCGTCCACCG GCTCGACAAG GAAACCTCCG GCCTGATGGT CGTGGCGCGC ACGCTGGCCG CGCAGACCGA CCTCGTGCGC CAGTTGCAGG CCCGCACGGT GAAGCGCCGC TATTTCGCGC TGGTGTGGGG CACGATGCCC GAGGCGGGCA CGATCGACGC GCCGATCGGC CGCGATCCGC GCGAGCGCAC GCGCATGGCT GTCGTCACCG GCGCGTCGGG CAAGCCCGCG CGCACGCATT TCCGCACGGT TGACACATGC CTGTGGCAAC GTCAGCCGGT TTCGGCGATT CAGTGCGATC TCGAAACCGG CCGCACGCAC CAGATCCGCG TGCACTGCGC GCACGCCGGG CATCCGCTGC TCGGCGATCC GGTCTACGGG CGGGCGCGCG GCAAGCGCTC GGTCACGCCG CTGCCGGACG GGTTCGCACG ACAGGCGCTG CATGCGTGGC GGCTCGGCCT CGTGCATCCG GTCACGGGCA AGGCGATGCA GTGGCGCTGC CCGCTGCCGG ACGACATGAA CACGCTGGTC GCCGCGCTGG GCTTCGGGCA GGGCGACGAG GAATTCGACG ACGACGACGG TGTCTACGAC GATGACGACT TCGGCGGCGA GTATCACGAC GACGAGCCGT ACCTGGACGA TGAGGAGGAG TGA
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Protein sequence | MQPPVVPSAA LDEAPRVVEV PLSLAGERLD KALAQLFPEF SRSRLQSWIE AQRVLVDGAP AKIRQPVPLG AKIALVPDLL PEQLAFTPEP VPLDVIYEDD ALVVINKPAG LVVHPAAGNW SGTILNGLLH RYGDAAAGLP RAGIVHRLDK ETSGLMVVAR TLAAQTDLVR QLQARTVKRR YFALVWGTMP EAGTIDAPIG RDPRERTRMA VVTGASGKPA RTHFRTVDTC LWQRQPVSAI QCDLETGRTH QIRVHCAHAG HPLLGDPVYG RARGKRSVTP LPDGFARQAL HAWRLGLVHP VTGKAMQWRC PLPDDMNTLV AALGFGQGDE EFDDDDGVYD DDDFGGEYHD DEPYLDDEEE
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