Gene Bcenmc03_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1817 
Symbol 
ID6123481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2018808 
End bp2019890 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content71% 
IMG OID641638386 
ProductRluA family pseudouridine synthase 
Protein accessionYP_001765100 
Protein GI170733153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.294999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGC CCGTCGTGCC GTCCGCGGCG CTCGACGAGG CGCCGCGCGT CGTCGAAGTG 
CCGCTGTCGC TCGCGGGTGA ACGCCTCGAC AAGGCGCTTG CCCAACTGTT CCCCGAATTC
TCGCGCAGCC GCCTGCAGAG CTGGATCGAG GCGCAGCGCG TGCTCGTCGA CGGCGCGCCG
GCGAAGATCC GTCAGCCGGT GCCGCTCGGC GCGAAGATCG CGCTCGTGCC CGATCTGTTG
CCCGAGCAGC TCGCGTTCAC GCCGGAGCCC GTGCCGCTCG ACGTGATCTA CGAGGACGAC
GCGCTCGTCG TCATCAACAA GCCGGCCGGC CTCGTCGTGC ATCCGGCCGC CGGCAACTGG
AGCGGCACGA TCCTCAACGG TCTGCTGCAT CGCTACGGCG ACGCGGCGGC CGGCCTGCCG
CGCGCAGGGA TCGTCCACCG GCTCGACAAG GAAACCTCCG GCCTGATGGT CGTGGCGCGC
ACGCTGGCCG CGCAGACCGA CCTCGTGCGC CAGTTGCAGG CCCGCACGGT GAAGCGCCGC
TATTTCGCGC TGGTGTGGGG CACGATGCCC GAGGCGGGCA CGATCGACGC GCCGATCGGC
CGCGATCCGC GCGAGCGCAC GCGCATGGCT GTCGTCACCG GCGCGTCGGG CAAGCCCGCG
CGCACGCATT TCCGCACGGT TGACACATGC CTGTGGCAAC GTCAGCCGGT TTCGGCGATT
CAGTGCGATC TCGAAACCGG CCGCACGCAC CAGATCCGCG TGCACTGCGC GCACGCCGGG
CATCCGCTGC TCGGCGATCC GGTCTACGGG CGGGCGCGCG GCAAGCGCTC GGTCACGCCG
CTGCCGGACG GGTTCGCACG ACAGGCGCTG CATGCGTGGC GGCTCGGCCT CGTGCATCCG
GTCACGGGCA AGGCGATGCA GTGGCGCTGC CCGCTGCCGG ACGACATGAA CACGCTGGTC
GCCGCGCTGG GCTTCGGGCA GGGCGACGAG GAATTCGACG ACGACGACGG TGTCTACGAC
GATGACGACT TCGGCGGCGA GTATCACGAC GACGAGCCGT ACCTGGACGA TGAGGAGGAG
TGA
 
Protein sequence
MQPPVVPSAA LDEAPRVVEV PLSLAGERLD KALAQLFPEF SRSRLQSWIE AQRVLVDGAP 
AKIRQPVPLG AKIALVPDLL PEQLAFTPEP VPLDVIYEDD ALVVINKPAG LVVHPAAGNW
SGTILNGLLH RYGDAAAGLP RAGIVHRLDK ETSGLMVVAR TLAAQTDLVR QLQARTVKRR
YFALVWGTMP EAGTIDAPIG RDPRERTRMA VVTGASGKPA RTHFRTVDTC LWQRQPVSAI
QCDLETGRTH QIRVHCAHAG HPLLGDPVYG RARGKRSVTP LPDGFARQAL HAWRLGLVHP
VTGKAMQWRC PLPDDMNTLV AALGFGQGDE EFDDDDGVYD DDDFGGEYHD DEPYLDDEEE