Gene Bcenmc03_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1629 
Symbol 
ID6123305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1815178 
End bp1817316 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content68% 
IMG OID641638210 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_001764924 
Protein GI170732977 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00385709 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAAC GACAGATATC CGGGCGGCGT TTTCCTGTGC TGGCCCTGTC GCTGTGCTCG 
ATCGCCGGCG TTGCCTCCTT CCCTGCCCCG GCGGCCGAGT TCGACGACGA ACTGCCTGCG
GTCGAAGTAC GCAGCCGCCG TCATCCGAAC GATCCGCGCG CCGAAAGCGT GAGTACGGCG
ACGCGCACCG CGAGCGATCC GCGCGACGTA CCGCAAACCA TCGACAGCGT CCCGGTAGAG
GAAACGCTGT CCTATGGCGG CCGCACGCTC GCCGACGCGC TGGCCGGCGT GCCCGGTGTG
TCCAATACGT CGGACACGCG CTTCGATTCG TTCCGCATTC GCGGCTTTTC CGCCGCGGGC
GACCTGCTGC TCGACGGCAT GCGCGACGAT GCGCAATACG TGCGCAGCCT CGGCAACATC
GAACGCGTCG AAGTGCTGAA GGGGCCGGCA GCGGCGCTGT ACGGGCGCGG CAGCGGCGGC
GGCGTCATCA ACCGGATCAC CAAACAGCCG TTGCCGGAAA ACTTCGGACA TGTGTCGGCG
GCGACCGGCA GCTACGGACG GCTCGGCGCG TCGATCGATC TCAACCGGAT GCTGTCCAGC
GCGTGGAGCG TGCGGCTCAA TGCGGGACGC GAACACGCCG GCAGCTTCCG CGACCACGTC
GACGGCACGC GTCAGTACGT CGCGCCGTCG ATCAAATGGC GGGACGCGCG GCGAAGCTGG
CTGCTGCAGT TCGAATACGA CGCGTACCGG CGCGTGCCCG ATCGCGGCAT GCCGGCGCCG
GTCGCCGCGC TCGACGCGGC CGGCAAGCCG GTCACGTTCT CGCTGCCGTC CGCGCCACGC
GCAACCTTCT TCGGCGCGGC GGGCCGCGAC ACGATCCGCG ACGAAAACAT GAACTGGCGC
TCGGTCTTCA CGCACGCGCT CGACGACGAC TGGGAATTGC GCCATACGCT CGGCGTGCTG
AATTTGCGCA GCACCTTCGA CAATACCTAC GTCACGCAAA GCTACGTCGC GAAGCCGCGC
GACTACCGGC AGGTGCAACG CGCACGCTAT CTGCAGGACA TGACGCATCT CAACGTCCAG
ACCGGCGTCG AACTGGGCGG CAAGGTCGCA ACCGGTCCGG CGCAGCATCA TCTGCTGTTC
GGCATCGAAT ACGGCTGGCA GAAACGCACG CCGACGCTCT GGCAGGCCGA CGCGGCGCCG
ATTCCGGTGA CCGGGCCGGA TCGCTTCGCC CTGGTCGGCT CGACGCCGCG CCCGTACGCG
ATGAACCGCC ACCGCGTCAG CGACTACGCG ATCTTCGCGC AGGATCGCGT CGACCTCGGG
CGAGCGTGGA AGCTCCTCGG CGGCCTGCGC GGGGAACGTT TCGACGTCGA TTCGACCAAC
GCGCTGAACG GCCTGCATGC GCGGCGCACG ACGGCGGCAT GGAGCCCGCG GCTCGGCGTC
GTGTGGTCGC CGGTCGGCGC GCACAGCCTG TATGCGTCGT ACAGCAAGAA CTTCGCGCCG
GTCGGTGGCG ACCTGATCGG CATCACGCCC GACGCGCGCG GCAACGCCAA CGATCTCGGC
CCGCAATACA CGCGCCAATA CGAGATCGGC GTGAAAAGCG ACTGGCGCGG CGGCGCGCTG
AGCACGACGC TCGCGCTGTT TCAGCTCGAC CTGTACAACC GCCGCATCGC CGACCCGGTT
CGCCCGGGCT TTTTCGACCT CACCGGCCTC GAGCGCAATC GCGGCGTGGA ACTGGGCGTC
GCCGGCCGGC TCGCGGGCGA CTGGTTCGTC CGCGGCGGCA TCGGCTGGCA ACAGGCGCGG
GTGGTCGACG CCGAACCGAA GTACGCGGGC AAGCGCTCGG CGGGCGTGTC GGCGTCGAAC
GGCAGCCTGT TCGTCAGCCA TGCGCCGCTA CGCGGTTTTT TCGCGGAACT CGGGATGGTG
TACGAAGGCG CGCGCTACGC CGATCGCGAC AACCTGCTCG AACTGCCCGT GTACGTTCGC
TGGGACGGCA AGGCCGGCTA CCGCACGCGC GACCTCGAAG TGACGCTGGC GGCCGTCAAT
CTCACCGATC GCGACTATTA CGCGAATGCG ACGGGTCTCG CGCAGATCAT GCCCGGCGCG
CCACGCACGT TCACGCTGAC GGCGACGTAC AAGTTCTGA
 
Protein sequence
MSKRQISGRR FPVLALSLCS IAGVASFPAP AAEFDDELPA VEVRSRRHPN DPRAESVSTA 
TRTASDPRDV PQTIDSVPVE ETLSYGGRTL ADALAGVPGV SNTSDTRFDS FRIRGFSAAG
DLLLDGMRDD AQYVRSLGNI ERVEVLKGPA AALYGRGSGG GVINRITKQP LPENFGHVSA
ATGSYGRLGA SIDLNRMLSS AWSVRLNAGR EHAGSFRDHV DGTRQYVAPS IKWRDARRSW
LLQFEYDAYR RVPDRGMPAP VAALDAAGKP VTFSLPSAPR ATFFGAAGRD TIRDENMNWR
SVFTHALDDD WELRHTLGVL NLRSTFDNTY VTQSYVAKPR DYRQVQRARY LQDMTHLNVQ
TGVELGGKVA TGPAQHHLLF GIEYGWQKRT PTLWQADAAP IPVTGPDRFA LVGSTPRPYA
MNRHRVSDYA IFAQDRVDLG RAWKLLGGLR GERFDVDSTN ALNGLHARRT TAAWSPRLGV
VWSPVGAHSL YASYSKNFAP VGGDLIGITP DARGNANDLG PQYTRQYEIG VKSDWRGGAL
STTLALFQLD LYNRRIADPV RPGFFDLTGL ERNRGVELGV AGRLAGDWFV RGGIGWQQAR
VVDAEPKYAG KRSAGVSASN GSLFVSHAPL RGFFAELGMV YEGARYADRD NLLELPVYVR
WDGKAGYRTR DLEVTLAAVN LTDRDYYANA TGLAQIMPGA PRTFTLTATY KF