Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1629 |
Symbol | |
ID | 6123305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1815178 |
End bp | 1817316 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638210 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001764924 |
Protein GI | 170732977 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00385709 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAAAC GACAGATATC CGGGCGGCGT TTTCCTGTGC TGGCCCTGTC GCTGTGCTCG ATCGCCGGCG TTGCCTCCTT CCCTGCCCCG GCGGCCGAGT TCGACGACGA ACTGCCTGCG GTCGAAGTAC GCAGCCGCCG TCATCCGAAC GATCCGCGCG CCGAAAGCGT GAGTACGGCG ACGCGCACCG CGAGCGATCC GCGCGACGTA CCGCAAACCA TCGACAGCGT CCCGGTAGAG GAAACGCTGT CCTATGGCGG CCGCACGCTC GCCGACGCGC TGGCCGGCGT GCCCGGTGTG TCCAATACGT CGGACACGCG CTTCGATTCG TTCCGCATTC GCGGCTTTTC CGCCGCGGGC GACCTGCTGC TCGACGGCAT GCGCGACGAT GCGCAATACG TGCGCAGCCT CGGCAACATC GAACGCGTCG AAGTGCTGAA GGGGCCGGCA GCGGCGCTGT ACGGGCGCGG CAGCGGCGGC GGCGTCATCA ACCGGATCAC CAAACAGCCG TTGCCGGAAA ACTTCGGACA TGTGTCGGCG GCGACCGGCA GCTACGGACG GCTCGGCGCG TCGATCGATC TCAACCGGAT GCTGTCCAGC GCGTGGAGCG TGCGGCTCAA TGCGGGACGC GAACACGCCG GCAGCTTCCG CGACCACGTC GACGGCACGC GTCAGTACGT CGCGCCGTCG ATCAAATGGC GGGACGCGCG GCGAAGCTGG CTGCTGCAGT TCGAATACGA CGCGTACCGG CGCGTGCCCG ATCGCGGCAT GCCGGCGCCG GTCGCCGCGC TCGACGCGGC CGGCAAGCCG GTCACGTTCT CGCTGCCGTC CGCGCCACGC GCAACCTTCT TCGGCGCGGC GGGCCGCGAC ACGATCCGCG ACGAAAACAT GAACTGGCGC TCGGTCTTCA CGCACGCGCT CGACGACGAC TGGGAATTGC GCCATACGCT CGGCGTGCTG AATTTGCGCA GCACCTTCGA CAATACCTAC GTCACGCAAA GCTACGTCGC GAAGCCGCGC GACTACCGGC AGGTGCAACG CGCACGCTAT CTGCAGGACA TGACGCATCT CAACGTCCAG ACCGGCGTCG AACTGGGCGG CAAGGTCGCA ACCGGTCCGG CGCAGCATCA TCTGCTGTTC GGCATCGAAT ACGGCTGGCA GAAACGCACG CCGACGCTCT GGCAGGCCGA CGCGGCGCCG ATTCCGGTGA CCGGGCCGGA TCGCTTCGCC CTGGTCGGCT CGACGCCGCG CCCGTACGCG ATGAACCGCC ACCGCGTCAG CGACTACGCG ATCTTCGCGC AGGATCGCGT CGACCTCGGG CGAGCGTGGA AGCTCCTCGG CGGCCTGCGC GGGGAACGTT TCGACGTCGA TTCGACCAAC GCGCTGAACG GCCTGCATGC GCGGCGCACG ACGGCGGCAT GGAGCCCGCG GCTCGGCGTC GTGTGGTCGC CGGTCGGCGC GCACAGCCTG TATGCGTCGT ACAGCAAGAA CTTCGCGCCG GTCGGTGGCG ACCTGATCGG CATCACGCCC GACGCGCGCG GCAACGCCAA CGATCTCGGC CCGCAATACA CGCGCCAATA CGAGATCGGC GTGAAAAGCG ACTGGCGCGG CGGCGCGCTG AGCACGACGC TCGCGCTGTT TCAGCTCGAC CTGTACAACC GCCGCATCGC CGACCCGGTT CGCCCGGGCT TTTTCGACCT CACCGGCCTC GAGCGCAATC GCGGCGTGGA ACTGGGCGTC GCCGGCCGGC TCGCGGGCGA CTGGTTCGTC CGCGGCGGCA TCGGCTGGCA ACAGGCGCGG GTGGTCGACG CCGAACCGAA GTACGCGGGC AAGCGCTCGG CGGGCGTGTC GGCGTCGAAC GGCAGCCTGT TCGTCAGCCA TGCGCCGCTA CGCGGTTTTT TCGCGGAACT CGGGATGGTG TACGAAGGCG CGCGCTACGC CGATCGCGAC AACCTGCTCG AACTGCCCGT GTACGTTCGC TGGGACGGCA AGGCCGGCTA CCGCACGCGC GACCTCGAAG TGACGCTGGC GGCCGTCAAT CTCACCGATC GCGACTATTA CGCGAATGCG ACGGGTCTCG CGCAGATCAT GCCCGGCGCG CCACGCACGT TCACGCTGAC GGCGACGTAC AAGTTCTGA
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Protein sequence | MSKRQISGRR FPVLALSLCS IAGVASFPAP AAEFDDELPA VEVRSRRHPN DPRAESVSTA TRTASDPRDV PQTIDSVPVE ETLSYGGRTL ADALAGVPGV SNTSDTRFDS FRIRGFSAAG DLLLDGMRDD AQYVRSLGNI ERVEVLKGPA AALYGRGSGG GVINRITKQP LPENFGHVSA ATGSYGRLGA SIDLNRMLSS AWSVRLNAGR EHAGSFRDHV DGTRQYVAPS IKWRDARRSW LLQFEYDAYR RVPDRGMPAP VAALDAAGKP VTFSLPSAPR ATFFGAAGRD TIRDENMNWR SVFTHALDDD WELRHTLGVL NLRSTFDNTY VTQSYVAKPR DYRQVQRARY LQDMTHLNVQ TGVELGGKVA TGPAQHHLLF GIEYGWQKRT PTLWQADAAP IPVTGPDRFA LVGSTPRPYA MNRHRVSDYA IFAQDRVDLG RAWKLLGGLR GERFDVDSTN ALNGLHARRT TAAWSPRLGV VWSPVGAHSL YASYSKNFAP VGGDLIGITP DARGNANDLG PQYTRQYEIG VKSDWRGGAL STTLALFQLD LYNRRIADPV RPGFFDLTGL ERNRGVELGV AGRLAGDWFV RGGIGWQQAR VVDAEPKYAG KRSAGVSASN GSLFVSHAPL RGFFAELGMV YEGARYADRD NLLELPVYVR WDGKAGYRTR DLEVTLAAVN LTDRDYYANA TGLAQIMPGA PRTFTLTATY KF
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