Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1619 |
Symbol | |
ID | 6123295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1803814 |
End bp | 1806078 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641638200 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001764914 |
Protein GI | 170732967 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00285071 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAAAG TGGAGCAGAA GAAGATGGAG TGGGCAACAG GCACGCGTTT GCGTGCGATC GCAGCCGCGG CAAGCGTGGC GTTCGGTACG GCGGCGGCAG GGCACGCCTA TGCCCAGACG GCGCCGGCCG TGAACGCGGG CGCCACGGCG TCGGCGAGCA GTGCGCAAAC CGGCGCGACG GCGACGACGT CGACCAGCGC GCAAAACGGC ACGCTGCCGG CGATCACCGT CAACGCGGCC TCGGCCGGAG ACGGCACGGT CGGGCTCGTC GCGAAACGCA GCACGACCGG CACCAAGACC GACACGCCGC TCAACGAGAT CCCGCAGACG ATCAACGTCG TCACCGCGCA GCAGATCGAG ATGACCGGCG CCACCGACGT GAACGCGGCG CTGCGCTACG TGCCGGGCTT CTCGTCGTAC GGGTCGGACA ACCGCTCCGA CTGGTACGCG GCGCTGCGCG GCTTCACGCC GACCGCCTAC GTGAACGGGC TGCAGGTGCC GAACACGATC AACCTCGCGA GCTGGCGCGT CGATCCGTAC ATGATCGACA GCATCAGCGT GCTGCGCGGG CCGACCTCGG TGCTGTACGG CGCGGGCGAT CCGGGCGCGA TCATCGACGT GCACACCAAG CTCGCCGACG GCGAGCGCGT GCGCGAAGCA GGCGTGCAGA TCGGCAACTA CGCGCGCAAG CAGTTCATGA TCGACGTCGG CGACAAGCTC GACCCGGACG GCAAGTATGC GTACCGGTTC GTCGGCGTCG CGCGCGACGG CAACGCGCTG ACGGGCCCGA ACAACGACCA GCGCGTCGCG CTCGCGCCGT CGTTCCGCTG GCGCCCGGAC GCGGATACGT CGCTGACGCT GTCCGCGACC TACCTGCAGG ACTGGGGCGA CATCTCGTCG AACTTCCTGC CCGCGCAAGG CACGGTGCTG CCGAACCCGA ACGGCCAGAT CAACAAGGAC GTCTACGAAG GCGACGGCAA CTTCAACTAC TACCGCAAGA AGCAGTGGTC GGTCGGTTAC CAGTTCGAGC GCAACCTGAC GCCGGCCTGG ACGTTCCGCC AGAACACGCG GCTGATGCAC CTGTCGCTCG ACAACGGCTC GGTGTTCGGC AACGGTTTCG TCGAGGGCAG CACGACCGAC GTGTCGCGCT GGGCCGGCGT GTTCCAGATG AACTACAGCC GCTTCGACAT CGACAACAAC CTCGAGGGCC GCTTCGCGAC GGGCCCGCTG CAGCACACGC TGCTGCTCGG CTTCCAGTAC AACCGCCAGA CCGCGACCGA CAGCGAATGG CTCGCCGCCG CGCCCCCGCT GAACATCTAC AACCCGGTCT ATCAGCCCGT CACGACGGCG GTGTTCACGC CCGACGCGAC GATCCGCACC AACACGTACA CGACGATGAA CACGTTCGGC CTGTACGCGC AGGATCAGAT CAAGTGGAAC CGCTGGACGC TGACGCTCGG CGGCCGCGAG GACTGGGTCA ACATGCGGAT GGACGACCGC GCGGCCGGTA CGTCGACGAA GGCGGACGTC ACGGCGTTCA CGGGCCGCGT CGGCCTCACG TACCAGGGCG ACTACGGGCT GTCGCCGTAC GTCAGCTACG CGACGTCGTT CAACCCGTTG ATCGGCGTGA ACCTGGTCGG CGGCGGGCTG CCGCAGCCGA CGCGCGGCAA GCAGATCGAA GCCGGCCTGC GCTGGCAGCC GCCCGGCAAG AACCTGATGC TGAACGCGGC GATCTACCAG ATCAACCAGA CCAACGTGCT CACGTCGGCG CTGCCGAGCC AGGACACGAC CGGCACGAAG TCGGTGCAGA CGGGCGAAGT GCGCTCGCGC GGGATCGAGC TGAGCGCGAC CGGCAAGGTC ACGCGCAACC TGTCGGTGAT CGCGTCGTAC GTCTATCAGG ACGTGAAGAA CGTGCAGGCC AACGACGTCT CGCTGAACAA CTGGCCGGTC GACATTCCGC GCCCGCGCCA GATGGCGTCG CTGTGGACCG ACTGGACGTG GTACACGGGG CCGCTCGCCG GCTTCGGCCT CGGCGGCGGC ATTCGCTACC AGAGCGCGTC GGCCGGTGCG GCCGACAATT CGCTGACGGT ATCGAGCGTC ACGCTGTTCG ACGCGGGCCT GCATTACGAC GTGCGTAACT GGCGCTTCGC CGTGAACGGG ACGAACCTGT TCAACCGCCA TTACATCAGC GGTTGCCAGT CGAACAACGT CTGCATTTTC GGGACCGACC GCACCGTGAT CGCGACCGCG AAATACAACT GGTGA
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Protein sequence | MKKVEQKKME WATGTRLRAI AAAASVAFGT AAAGHAYAQT APAVNAGATA SASSAQTGAT ATTSTSAQNG TLPAITVNAA SAGDGTVGLV AKRSTTGTKT DTPLNEIPQT INVVTAQQIE MTGATDVNAA LRYVPGFSSY GSDNRSDWYA ALRGFTPTAY VNGLQVPNTI NLASWRVDPY MIDSISVLRG PTSVLYGAGD PGAIIDVHTK LADGERVREA GVQIGNYARK QFMIDVGDKL DPDGKYAYRF VGVARDGNAL TGPNNDQRVA LAPSFRWRPD ADTSLTLSAT YLQDWGDISS NFLPAQGTVL PNPNGQINKD VYEGDGNFNY YRKKQWSVGY QFERNLTPAW TFRQNTRLMH LSLDNGSVFG NGFVEGSTTD VSRWAGVFQM NYSRFDIDNN LEGRFATGPL QHTLLLGFQY NRQTATDSEW LAAAPPLNIY NPVYQPVTTA VFTPDATIRT NTYTTMNTFG LYAQDQIKWN RWTLTLGGRE DWVNMRMDDR AAGTSTKADV TAFTGRVGLT YQGDYGLSPY VSYATSFNPL IGVNLVGGGL PQPTRGKQIE AGLRWQPPGK NLMLNAAIYQ INQTNVLTSA LPSQDTTGTK SVQTGEVRSR GIELSATGKV TRNLSVIASY VYQDVKNVQA NDVSLNNWPV DIPRPRQMAS LWTDWTWYTG PLAGFGLGGG IRYQSASAGA ADNSLTVSSV TLFDAGLHYD VRNWRFAVNG TNLFNRHYIS GCQSNNVCIF GTDRTVIATA KYNW
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