Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1599 |
Symbol | |
ID | 6123275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1766424 |
End bp | 1769564 |
Gene Length | 3141 bp |
Protein Length | 1046 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641638180 |
Product | multidrug efflux protein |
Protein accession | YP_001764894 |
Protein GI | 170732947 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.533653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTT TCTTCATCGA TCGCCCCATC TTCGCGTGGG TGATCGCCAT CTTCATCATG CTGGGCGGCC TGTTCGCGAT CCGTGCGCTG CCCGTCGCGC AGTACCCGGA CATCGCGCCG CCCGTCGTCA GCATCTATGC GACGTATCCG GGCGCGTCCG CGCAGGTCGT CGAGGAATCG GTGACCGCGC TGATCGAGCG CGAGATGAAC GGCGCGCCGG GGCTGCTGTA TACATCCGCG ACGAGCAGCG CCGGCGCGGC GTCGCTGTAC CTGACGTTCA AGCAGGGCGT GAACGCCGAT CTCGCGGCCG TCGAAGTGCA GAACCGGCTG AAGACGGTCG ATGCGCGCCT GCCCGAGCCG GTGCGCCGCG ACGGCATCCA GGTCGAGAAG GCCGCCGACA ACATCCAGCT CGTCGTGTCG CTGACCTCCG ACGACGGCCG GATGACCGAC GTGCAGCTCG GCGAATACGC GTCGGCGAAC GTCGTGCAGG CGTTGCGCCG CGTCGAGGGT GTCGGCAAGG TGCAGTTCTG GGGCGCCGAA TATGCGATGC GGATCTGGCC CGACCCGGTG AAGCTGGCCG GGCATGGCCT CACCGCGTCG GACATCGCAT CGGCCGTGCG TGCGCACAAC GCGCGCGTGA CGATCGGCGA CATCGGCCGC AGCGCGGTGC CGGACAGCGC GCCGATCGCG GCGACGGTGT TCGCGGACGC ACCGCTGAAG ACGCCGGCCG ATTTCGGCGC GATCGCGCTG CGTGCGCAAC CCGACGGCTC CGCGCTGTTC CTGCGCGACG TCGCACGCAT CGAGTTCGGC GGCAACGACT ACAACTATCC GTCGTACGTG AACGGCAAGG TCGCGACCGG GATGGGCATC AAGCTCGCGC CGGGCTCGAA CGCGGTGTCC ACCGAGAAGC GCGTGCGCGC GACGATGGAC GATCTGTCCA GGTACTTCCC GCCGGGCGTG AAATACCAGA TTCCGTACGA GACGTCGTCG TTCGTGCGCG TGTCGATGAA CAAGGTCGTC ACGACGCTGA TCGAGGCCGG CGTGCTGGTG TTCCTCGTGA TGTTCCTGTT CATGCAGAAC CTGCGCGCGA CGCTGATTCC GACACTCGTC GTGCCGGTCG CGCTCGCGGG CACGTTCGGC GTGATGTACG CGGCCGGCTT CTCGATCAAC GTGCTGACGA TGTTCGGGAT GGTGCTCGCG ATCGGCATCC TCGTCGACGA CGCGATCGTC GTCGTCGAGA ACGTCGAGCG GCTGATGGTC GAGGAAGGGC TCGCGCCGTA CGACGCGACC GTCAAGGCGA TGCGGCAGAT CAGCGGCGCG ATCGTCGGGA TCACCGTGGT GCTGACGTCG GTGTTCGTGC CGATGGCGTT CTTCGGCGGC GCGGTGGGCA ACATCTACCG GCAGTTCGCG CTGTCGCTCG CGGTGTCGAT CGGCTTCTCG GCGTTCCTCG CGCTGTCGCT GACGCCCGCG CTGTGCGCGA CGCTGCTCAA GCCGGTGTCG GGCGACCATC ACGAGAAGCG CGGCTTCTTC GGCGGGTTCA ACCGCTTCGT CGCGCGGGCG ACGCAGCGCT ACGCGACGCG GGTCGGCACG ATGCTGAAGA AGCCGGTGCG CTGGCTCGTC GTGTACGGCG CGCTGACTGC GGCGGCCGCG CTGATGCTCA CGCAGCTGCC GACCGCGTTC CTGCCGGACG AGGACCAGGG CAACTTCATG GTGATGGTGA TCCGCCCGCA AGGCACGCCG CTCGCGGAGA CGATGCAGAG CGTGCGCGCG GTCGAGTCGG CCATCCGCCG CGACGAACCG ACCGCCTATA CGTATGCGCT CGGCGGCTTC AACCTGTACG GCGAAGGGCC GAACGGCGGG ATGATCTTCG TCACGCTGAA GAACTGGAAG GAACGCAAGG CCGAGCGCGA TCACGTGCAG TCGATCGTCG CGCGCATCAA CGAGCGCTTC GCGGGCACGC CGAACACGAC GGTGTTCGCG ATGAACTCGC CGGCGCTGCC CGATCTCGGT TCGTCGAGCG GCTTCGACTT CCGGCTGCAG AACCGCGGCG GGCTCGACTA CGCGACGTTC AGCGCCGCGC GCGAGCAACT GCTCGCGGCG GGCGGCAAGG ATCGCGCGCT CACCGACCTG ATGTTCGCGG GCACGCAGGA CGCGCCGCAA CTGAAGCTCG ACATCGATCG CGCGAAGGCG TCCGCGCTCG GCGTGTCGAT GGACGAGATC AACACGACGC TCGCGGTGAT GTTCGGCTCC GACTATATCG GCGACTTCAT GCACGGCACG CAGGTGCGGC GCGTGATGGT GCAGGCCGAC GGGCGGCACC GGCTCGATCC GGACGACGTG AAGAAGTTGC GCGTGCGCAA CGCGCGCGGC GAGATGGTGC CGCTCGCGGC GTTCACGACA CTGCACTGGA CGCTCGGGCC GCCGCAGCTC ACGCGCTACA ACGGCTATCC GTCGTTCACG ATCAACGGCT CGGCCGCGGC CGGCCACAGC AGCGGCGAGG CGATGAGCGC GATCGAGCGG ATCGCCGCGA CGCTGCCGGC CGGCATCGGC TATGCGTGGT CGGGGCAGTC GTTCGAGGAG CGGCTGTCGG GCGCGCAGGC GCCGATGCTG TTCGCGCTGT CGGTGCTCGT CGTGTTCCTC GCGCTCGCGG CGCTCTACGA GAGCTGGTCG ATTCCGTTCG CGGTGATGCT GGTCGTCCCG CTCGGCGTGA TCGGCGCGGT GCTCGGCGTG ACGCTGCGCG CGATGCCGAA CGACATCTAT TTCAAGGTGG GGCTGATCGC GACGATCGGG CTGTCCGCGA AGAACGCGAT CCTGATCGTC GAGGTCGCGA AGGATCTCGT CGCGCAGCGC ATGTCGCTCG TCGACGCGGC GCTCGAGGCC GCGCGCCTGC GGCTGCGGCC GATCGTGATG ACGTCGCTCG CGTTCGGCGT CGGCGTGCTG CCGCTCGCGT TCGCGTCGGG CGCCGCGTCC GGCGCGCAGA TGGCGATCGG CACCGGCGTG CTCGGCGGCG TGATCACGGC GACCGTGCTC GCGGTGTTTC TCGTCCCGCT GTTTTTCGTG ATCGTCGGCC GCCTGTTCGA CGTCGGCCCG CGCCGGCGCG GCGGGGCGCA GCCGACGACG ATGGAGGGTT CGCAACCATG A
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Protein sequence | MARFFIDRPI FAWVIAIFIM LGGLFAIRAL PVAQYPDIAP PVVSIYATYP GASAQVVEES VTALIEREMN GAPGLLYTSA TSSAGAASLY LTFKQGVNAD LAAVEVQNRL KTVDARLPEP VRRDGIQVEK AADNIQLVVS LTSDDGRMTD VQLGEYASAN VVQALRRVEG VGKVQFWGAE YAMRIWPDPV KLAGHGLTAS DIASAVRAHN ARVTIGDIGR SAVPDSAPIA ATVFADAPLK TPADFGAIAL RAQPDGSALF LRDVARIEFG GNDYNYPSYV NGKVATGMGI KLAPGSNAVS TEKRVRATMD DLSRYFPPGV KYQIPYETSS FVRVSMNKVV TTLIEAGVLV FLVMFLFMQN LRATLIPTLV VPVALAGTFG VMYAAGFSIN VLTMFGMVLA IGILVDDAIV VVENVERLMV EEGLAPYDAT VKAMRQISGA IVGITVVLTS VFVPMAFFGG AVGNIYRQFA LSLAVSIGFS AFLALSLTPA LCATLLKPVS GDHHEKRGFF GGFNRFVARA TQRYATRVGT MLKKPVRWLV VYGALTAAAA LMLTQLPTAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRA VESAIRRDEP TAYTYALGGF NLYGEGPNGG MIFVTLKNWK ERKAERDHVQ SIVARINERF AGTPNTTVFA MNSPALPDLG SSSGFDFRLQ NRGGLDYATF SAAREQLLAA GGKDRALTDL MFAGTQDAPQ LKLDIDRAKA SALGVSMDEI NTTLAVMFGS DYIGDFMHGT QVRRVMVQAD GRHRLDPDDV KKLRVRNARG EMVPLAAFTT LHWTLGPPQL TRYNGYPSFT INGSAAAGHS SGEAMSAIER IAATLPAGIG YAWSGQSFEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP LGVIGAVLGV TLRAMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQR MSLVDAALEA ARLRLRPIVM TSLAFGVGVL PLAFASGAAS GAQMAIGTGV LGGVITATVL AVFLVPLFFV IVGRLFDVGP RRRGGAQPTT MEGSQP
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