Gene Bcenmc03_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1573 
Symbol 
ID6123249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1735313 
End bp1736227 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID641638154 
Productnodulation ABC transporter NodI 
Protein accessionYP_001764868 
Protein GI170732921 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01288] ATP-binding ABC transporter family nodulation protein NodI 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG CACCGATCGA TTTACGCAAC GTCGAAAAGC GCTATGGCGA CAAGCTCGTC 
GTCAACGGTC TGTCCTTCAA CGTGAAGGCC GGCGAATGCT ATGGCCTGCT CGGGCCGAAC
GGCGCCGGCA AGACCACGAC GCTGAAGATG CTGCTCGGCC TCGCGCACCC CGATGCAGGC
ACTATTTCGC TGTGCGGCGA ACCGGTTCCA TCGCGTGCGC GACACGCACG CCAGCGGGTC
GGCGTCGTCC CGCAGTTCGA CAACCTCGAC CCCGACTTCA CCGTGCGCGA GAACCTGCTC
GTGTTCAGCC GCTATTTCGG GATGTCGGCG CAGGCCGCAC GCGCGCTCGT CCCGCCGCTG
CTCGAATTCG CGAAGCTGGA AAACAAGGCC GACGCGAAGG TCGGCGAGTT GTCGGGCGGC
ATGAAGCGGC GCCTCACGCT CGCCCGCGCG CTCGTCAACG ATCCCGATGT GCTGGTGCTC
GACGAGCCCA CGACCGGCCT CGATCCGCAG GCGCGGCACC TGATGTGGGA GCGGCTGCGT
TCGCTGCTCG CGCGCGGCAA GACGATCCTG ATCACCACGC ATTTCATGGA GGAAGCCGAG
CGCCTGTGCG ATCGGCTGTG CGTGATCGAG GAAGGCCGCA AGATCGCCGA AGGCGCGCCG
CATGCACTGA TCGAATCGGA GATCGGCTGC GACGTGATCG AGATCTACGG GCCTGATCCG
ACCGCGCTGC GCGACGAGTT GTCGGCATTC GCGAAGCACA CCGAGATCAG CGGCGAGACG
CTGTTCTGCT ATGTGATCGA CCCCGAACCG CTCACCACGC GTCTCAAGGG CCGCCCGGGG
TTGCGCTATC TGCATCGCCC GGCCAATCTG GAGGATGTGT TCCTGCGGCT CACAGGCCGC
GAGATGCAGG ACTGA
 
Protein sequence
MSVAPIDLRN VEKRYGDKLV VNGLSFNVKA GECYGLLGPN GAGKTTTLKM LLGLAHPDAG 
TISLCGEPVP SRARHARQRV GVVPQFDNLD PDFTVRENLL VFSRYFGMSA QAARALVPPL
LEFAKLENKA DAKVGELSGG MKRRLTLARA LVNDPDVLVL DEPTTGLDPQ ARHLMWERLR
SLLARGKTIL ITTHFMEEAE RLCDRLCVIE EGRKIAEGAP HALIESEIGC DVIEIYGPDP
TALRDELSAF AKHTEISGET LFCYVIDPEP LTTRLKGRPG LRYLHRPANL EDVFLRLTGR
EMQD