Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1519 |
Symbol | |
ID | 6123197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1684542 |
End bp | 1686095 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641638097 |
Product | ABC transporter related |
Protein accession | YP_001764816 |
Protein GI | 170732869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0747025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.022294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT CTGAGTCGCC CCGCCCGCTG CTCGAGATGC GCGGGATCAG CAAGACGTTC CCGGCCGTAC GCGCGCTCGA CAACGTCAGC CTGACCGTCT ATCCGGGCGA AATCCATTCG CTGATGGGCG AGAACGGCGC GGGCAAATCG ACGCTGATGA AGATCCTGTC GGGCGCCTAC CGCGCCGACG TCGGCGGCGA GATCCTGATC GACGGTCAAC GCATCGAGAT CGACGGTCCG CTCGCCGCAC GTGATGCCGG CGTCGCGGTG ATCTACCAGG AGCTGTGCCT GTCGCCGAAC CTGACCGTCG CGGAAAACAT CTACGTCGGC CGCGAACTGC GCCGCGGCAA CCGGCGCTGG GGCACGATCG ACCGCGCGGC GATGGCGCGC GGCTGCCAGG ACGTGCTCGC GCGCCTGGGT GCCCCGTTCG GGCCCGACAC GCTCGTCGAC ACACTGTCGA TCGCCGAACA GCAGCTCGTC GAAATCGCCC GCGCCGTGCA TACCCGTGCC CGCATCCTCG TGATGGACGA GCCGACCACG CCGCTGTCGT CGCGCGAAAC CGAACACCTG TTCCGCCTGA TCCGCCAGTT GCGCGAGGAA GGCCTCGCGA TCATCTACAT CAGCCACCGG ATGGCGGAGA TCTACGAGCT GTCCGACCGC GTGTCGGTGC TGCGCGACGG CGCGTACGTC GGCACGCTGG AGCGCGCGTC GCTGTCGGCC GAGCGGCTCG TCGCGATGAT GGTCGGCCGC GACATCTCCG GTTTCTACAA GAAGGAACAC GCGCCGTACG ACCCCGGCCA CCTGCTGCTG TCGGTCCGCG ACATCGCCGA CGGTGCGCGT GTTCGCGGCT GCAGCCTCGA CCTGCATGCC GGCGAAGTGC TCGGCATCGC GGGGCTCGTC GGCGCGGGCC GCACCGAGCT CGCACGGCTG ATCTTCGGGG CCGAACCACG CGTGCGCGGC GACGTGAAGC TGGGCGAGCG CACGTTCGGC GCGCACTCGC CGCGCGACGC GATCGACGCA GGCCTCGTCT ACCTGACCGA AGACCGCAAG CGCCAGGGCC TGTTCCTCGA CATGAGCGTG CGCGACAACA TCAACATCTC GGTGTGCAAC CGCGATGCGC GGCTCGGTGC GCTCGACCTC GCGCGCGGCG CCGAACGGGC GCGCGACGCC ATCGCGTCAC TGTCGATCCG GGTGCCGCAC GCGAACGTCA ACGTCGGCGC GCTGTCCGGC GGCAACCAGC AGAAAGTGCT GCTGTCGCGC CTGCTCGAGA CGAAGCCGCG CGTGCTGATC CTCGACGAAC CGACACGCGG CGTCGACATC GGCGCGAAAT CCGAGATCTA CCGGATCATC AACGAACTGG CCCGTGCCGG CGTGGGCGTA ATCGTGATCT CGAGCGAACT GCCGGAAATC ATCGGCGTCG CCGACCGCGT GCTCGTGATG CGCGAAGGCG AGATCGCAGG CGAACTCGGC GGCCACACGC ATACGCCGAT CACGCAGGAA GCGATCATCG CGCTCGCCAC CGGCTCGCAG GCCGAACTGG CCGACGCGCA CTGA
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Protein sequence | MSHSESPRPL LEMRGISKTF PAVRALDNVS LTVYPGEIHS LMGENGAGKS TLMKILSGAY RADVGGEILI DGQRIEIDGP LAARDAGVAV IYQELCLSPN LTVAENIYVG RELRRGNRRW GTIDRAAMAR GCQDVLARLG APFGPDTLVD TLSIAEQQLV EIARAVHTRA RILVMDEPTT PLSSRETEHL FRLIRQLREE GLAIIYISHR MAEIYELSDR VSVLRDGAYV GTLERASLSA ERLVAMMVGR DISGFYKKEH APYDPGHLLL SVRDIADGAR VRGCSLDLHA GEVLGIAGLV GAGRTELARL IFGAEPRVRG DVKLGERTFG AHSPRDAIDA GLVYLTEDRK RQGLFLDMSV RDNINISVCN RDARLGALDL ARGAERARDA IASLSIRVPH ANVNVGALSG GNQQKVLLSR LLETKPRVLI LDEPTRGVDI GAKSEIYRII NELARAGVGV IVISSELPEI IGVADRVLVM REGEIAGELG GHTHTPITQE AIIALATGSQ AELADAH
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