| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1481 |
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| Symbol | |
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| ID | 6123159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 1639688 |
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| End bp | 1641184 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638059 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001764778 |
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| Protein GI | 170732831 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.497778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT CCCCGTTGTC CGTGCGCGCC GGGTCGTGCC GTGCCGCCGT CGCCGCCGCG
GTCGCCGCGC TGGCGCTGGC GGGCTGCGCG AATTACATCG GCATCAAGAG CGACAAGCAG
ATCGCCCCCG CGTCGCAATT CGAATCCGCC CAGAGCCTGC CGGCCCAAGG CGGCCAGTGG
CCGGCGCTCG ATTGGGCCAA CCAGTTCGGC GATCCGCAAC TGCCGAAGCT GATCGACGAA
GCGCTGCAGG GCAACCCGTC GATCGCGCAG GCCCAGGCGC GCATCGCGAA AGCCTCGTCG
TACATCGAAT CGTCCCGCTC GAACCTGATG CCGAAGGCCG AAGCCAGCTA TTCGTGGACG
CGCGAGCTGT ATTCGTCGAA CGCACTGTTC CCGCCCCCGT ACGGCGGCCA GTGGTACAGC
GAGAACAATG TGCTCGCGAG CGCCTCGTGG GAACTCGATC TGTGGGGCAA GAACCGCGAA
CGCCTGCACA CGGCCGTATC GCAGGAAAAA GCCGCCGAAG CCGACATGCA ACAGGCGCGC
ATCACGCTCG CGTCGTCGGT CGCGCGCACC TATAACTCGC TCGCGCAGCT CTATGCGCTG
CGCGACATCG CGCAGCGCGA GATCACCAAC CGCGAGACGG TCGGCAAGAT CACCGACGGC
CGCGTATCGG CCGGCCTCGA CACCAACGTC GAGCGCCAGA CGGCCCGCGG CAACATCGCG
ACGACTCAGG CTTCGCTGTC GGACCTCGAC GGGCAGATCA CGACGGTGCG CTACCAGCTC
GCCGCACTGC TCGGCAAGGG CCCGGATCGC GGGCTGCAGA TCGCGGCGCC CGTACTGAAC
CCGAGCGGCG ACGTCACGCT GCCCGGCAAC CTGCCGGCCG ATCTCGTGTC GCGCCGCCCC
GACATCGTCG CCGCGCGCTG GCAGGTCGAA GCCGCGATGC ACGACGTGAA GGAAGCGAAG
GCCGAGTTCT ACCCCGACGT GAACCTCGCG GCCGGCTTCG GCTTCGATGC GTTCGGCTGG
GGCAAATTCC TGAATTTCGC GAGCCGCCAG GCGCAGTTCG GCCCGGCGAT CCACCTGCCG
ATCTTCGATG CCGGCGCGCT GCGCGCTCAG CTCAAGGGCC GCTACGCCGA CTTCGACCTG
TCGGTCGCGA ACTACAACCA GACGCTGATC AGCGCGCTGA ACGACGTCGC GACGCAGGTC
GCGTCGATCC GCGCGATCGA TCGGCAGATG GGCGACGCCC AACGTGCGCT CGACGCATCG
ACGCGCGCGT ACGATCTCGC GGTCATTCGC TACAAGGCCG GCCTGTCGCC GCAACTGCAG
GTGCTGACGG CGGACAGCAA CCGCCTCGCA TCGGAGCAGA CGGTGACCAA CCTGAAGATG
CGTCGCCGCG ACATGCAGCT CGCGCTGATC AAGGCGCTCG GCGGCGGGTT CGACGCAACC
GGCACGCCGC TCGCCGCGCC CGATGCCGCC ACGCCGACCA AACAGGCCGC CAACTGA
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| Protein sequence | MKTSPLSVRA GSCRAAVAAA VAALALAGCA NYIGIKSDKQ IAPASQFESA QSLPAQGGQW
PALDWANQFG DPQLPKLIDE ALQGNPSIAQ AQARIAKASS YIESSRSNLM PKAEASYSWT
RELYSSNALF PPPYGGQWYS ENNVLASASW ELDLWGKNRE RLHTAVSQEK AAEADMQQAR
ITLASSVART YNSLAQLYAL RDIAQREITN RETVGKITDG RVSAGLDTNV ERQTARGNIA
TTQASLSDLD GQITTVRYQL AALLGKGPDR GLQIAAPVLN PSGDVTLPGN LPADLVSRRP
DIVAARWQVE AAMHDVKEAK AEFYPDVNLA AGFGFDAFGW GKFLNFASRQ AQFGPAIHLP
IFDAGALRAQ LKGRYADFDL SVANYNQTLI SALNDVATQV ASIRAIDRQM GDAQRALDAS
TRAYDLAVIR YKAGLSPQLQ VLTADSNRLA SEQTVTNLKM RRRDMQLALI KALGGGFDAT
GTPLAAPDAA TPTKQAAN
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