| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1476 |
|---|
| Symbol | infB |
|---|
| ID | 6123154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1632362 |
|---|
| End bp | 1635277 |
|---|
| Gene Length | 2916 bp |
|---|
| Protein Length | 971 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641638054 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_001764773 |
|---|
| Protein GI | 170732826 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.809339 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTA ACAACGTAGC CCAATTTGCC GCGGAACTGA AAATGCCTGC TGGTGTGCTG
CTCGAACAGC TGCAGGCAGC GGGCGTCCAG AAAGCGAGTG AAGACGATGC GCTGTCCGAA
ACGGACAAGG CGCGTCTGCT CGATCATTTG CGCAAGTCGC ACGGCGCAAC TGACGGCGAC
AAGCGCAAGA TCACGCTGAC CCGCAAGCAT ACGTCGGAGA TCAAGCAATC TGACGCGACG
GGCAAGGCTC GCACCATTCA GGTCGAGGTT CGCAAGAAGC GTACGTTCGT CAAGCGCGAC
GACGTGGCCG AAGGTGCGGA TCAGGGTCAG GCGCAGGTCG CCGAAGCGGA CGACGATGCG
GAACTGAAGC GTCGCGAGGA AGAGGCACGC CGCGAGGCAG AGCTGCTCGA GAAGCAGGCG
CAGGAGCTGC GCGAGCGTCA GGAGCGCCTC GAACGCGAGG AAGCCGAACG TCGTGCCCGC
GAGGAAGCGG CCGAGGCCGA GCGCCGTCGC GCTGAGGAAG AAGCGGCGAC GAAGCGTGCC
GCGGCGGAAG CCGCCGCAGC CCAGCAGCAG GCGGCAGCGC AGCAGGCTGC TGCCGAGCAG
GAAGCGACGC CGACGCAGTC CGCGCAAGAC GAAGCACGCG CAGCCGCCGA ACGCGCGGCC
CAGCGCGAAG CGGCGAAGAA GGCCGAGGAC GCTGCCCGTG AGGCAGCCGA CAAGGCGCGC
GCCGAGCAGG AAGAGATCAG CAAGCGTCGC GCGGCGGCGG AAGCCGAAGC ACGCGCGATC
CGCGAAATGA TGAACACGCC GCGCAAGGCC GTGGTCAAGG CAGTCGAGCC GCCGAAGCCG
GTCGAACCGC CGAAGCCGGC CGAAGCGAAG GGCACGCTGC ACAAGCCGGC GAAGCCGGAA
GGTGCGCAGG CGCGTCCGGC CGTGAAGAAG CCGGCTGGCG CGGCGGCCCC GGCCACCACG
CAGGCGCCGG CAGGCGCGGG CGACCGCAAC AAGAAGCCGG GTGCAGGCAA GGGCGGCTGG
CAGGACGACG CGGCGAAGCG TCGCGGCATC AAGACGCGCG GCGACTCGAG CGGCGGCGTC
GACCGCGGCT GGCGCGGCGG CCCGAAGGGT CGCGGCCGTC ACCAGGACAG CTCGACGTTC
CAGGCGCCGA CCGAACCGAT CGTCCGTGAA GTGCACGTGC CGGAAACCGT GTCGGTTGCC
GATCTCGCGC ACAAGATGTC GATCAAGGCC TCGGAAGTCA TCAAGGTGAT GATGAAGATG
GGCCAGATGG TCACGATCAA CCAGGTGCTG GACCAGGAAA CGGCGATGAT CATCGTCGAG
GAACTGGGCC ACCGCGCGGT TGCCGCGAAG CTGGACGATC CGGAAGCGCT GCTCGTCGAA
GGCGAATCCG GTACCGATGC GGAGCAGCTG CCGCGTCCGC CGGTCGTCAC GGTGATGGGT
CACGTCGACC ACGGCAAGAC CTCGCTGCTC GACCACATCC GCCGCGCGAA GGTTGCCGCG
GGCGAAGCGG GCGGCATTAC GCAGCACATC GGCGCTTATC ACGTTGACAC GCCGCGTGGC
GTCATCACGT TCCTCGATAC GCCGGGTCAC GAAGCGTTCA CGGCAATGCG TGCACGCGGC
GCGAAGGCGA CCGACATCGT GGTGCTGGTG GTGGCGGCCG ACGACGGCGT GATGCCGCAG
ACGAAGGAAG CCATCGCTCA CGCGAAGGCG GGTGGCGTGC CGATCGTCGT CGCGATCAAC
AAGATCGACA AGCCGGAAGC GAACCCGGAT CGCGTCAAGC AGGAACTGGT CGCGGAAGGC
GTCGTGCCGG AAGAATACGG TGGCGATTCG CCGTTCGTGC CGGTGTCGGC CAAGACGGGC
GCAGGTATCG ACGATCTGCT CGAGAACGTG CTGCTGCAGG CCGAAGTGCT GGAACTGAAG
GCACCGGTCG AGGCGCCGGC CAAGGGTATC GTGATCGAAG CGAAGCTCGA CAAGGGTAAA
GGCCCGGTCG CGACGATCCT GGTGCAGTCC GGTACGCTGA ACCGCGGCGA TATCGTGCTG
GCCGGTACGG CCTATGGTCG CGTCCGTGCG ATGCTCGACG AGAACGGCAA GCCGACGAAG
GAAGCCGGCC CGTCGATCCC GGTCGAAATC CAGGGTCTGT CGGAAGTGCC AGGCGCAGGC
GAGGAAGTGA TCGTGCTGCC GGACGAGCGC AAGGCGCGTG AAATCGCGCT GTTCCGTCAG
GGCAAGTTCC GCGACGTGAA GCTCGCGAAG CAGCAGGCCG CGAAGCTGGA AAGCATGCTG
GAGCAGATGG GCGAAGGCGA AGTGCAGAAC CTGCCGCTCA TCATCAAGGC AGACGTGCAG
GGTTCGCAGG AAGCGCTCGT GCAGTCGCTG CTCAAGCTGT CGACCGACGA AGTGCGCGTG
CAGATCGTGC ACAGCGCGGT CGGTGGCATC AGCGAAAACG ACGTCAACCT CGCGACGGCA
TCGAAGGCGG TCATCATCGG CTTCAACACG CGTGCGGATG CACAGGCGCG CAAGCTGGCC
GAGGCGAACG GCATCGATAT CCGCTACTAC AACATCATCT ACGACGCAGT GGACGAGGTG
AAGGCGGCGA TGTCGGGCAT GCTGGCGCCG GAGAAGCGTG AAGTCATCAC CGGCATGGTC
GAGGTGCGCC AGGTCTTCAA GGTACCGAAG ATCGGCACGG TCGCCGGCTG TATGGTCACC
GACGGTATCG TCAAGCGCTC GTCGTCGGTT CGCGTGCTGC GCAACAACGT CGTGATCTTC
ACGGGCGAAC TCGAATCGCT GAAGCGCTTC AAGGACGACG TGAAGGAAGT CAAGCAAGGC
TTCGAGTGCG GTATGTCGGT GAAGAACTTC AACGACGTCA CCGAAGGCGA CCAGTTCGAA
GTATTCGAAG TGACCGAAGT CGCACGTACG CTGTAA
|
|---|
| Protein sequence | MASNNVAQFA AELKMPAGVL LEQLQAAGVQ KASEDDALSE TDKARLLDHL RKSHGATDGD
KRKITLTRKH TSEIKQSDAT GKARTIQVEV RKKRTFVKRD DVAEGADQGQ AQVAEADDDA
ELKRREEEAR REAELLEKQA QELRERQERL EREEAERRAR EEAAEAERRR AEEEAATKRA
AAEAAAAQQQ AAAQQAAAEQ EATPTQSAQD EARAAAERAA QREAAKKAED AAREAADKAR
AEQEEISKRR AAAEAEARAI REMMNTPRKA VVKAVEPPKP VEPPKPAEAK GTLHKPAKPE
GAQARPAVKK PAGAAAPATT QAPAGAGDRN KKPGAGKGGW QDDAAKRRGI KTRGDSSGGV
DRGWRGGPKG RGRHQDSSTF QAPTEPIVRE VHVPETVSVA DLAHKMSIKA SEVIKVMMKM
GQMVTINQVL DQETAMIIVE ELGHRAVAAK LDDPEALLVE GESGTDAEQL PRPPVVTVMG
HVDHGKTSLL DHIRRAKVAA GEAGGITQHI GAYHVDTPRG VITFLDTPGH EAFTAMRARG
AKATDIVVLV VAADDGVMPQ TKEAIAHAKA GGVPIVVAIN KIDKPEANPD RVKQELVAEG
VVPEEYGGDS PFVPVSAKTG AGIDDLLENV LLQAEVLELK APVEAPAKGI VIEAKLDKGK
GPVATILVQS GTLNRGDIVL AGTAYGRVRA MLDENGKPTK EAGPSIPVEI QGLSEVPGAG
EEVIVLPDER KAREIALFRQ GKFRDVKLAK QQAAKLESML EQMGEGEVQN LPLIIKADVQ
GSQEALVQSL LKLSTDEVRV QIVHSAVGGI SENDVNLATA SKAVIIGFNT RADAQARKLA
EANGIDIRYY NIIYDAVDEV KAAMSGMLAP EKREVITGMV EVRQVFKVPK IGTVAGCMVT
DGIVKRSSSV RVLRNNVVIF TGELESLKRF KDDVKEVKQG FECGMSVKNF NDVTEGDQFE
VFEVTEVART L
|
|---|
| |