| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1473 |
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| Symbol | |
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| ID | 6123151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1628127 |
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| End bp | 1629887 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641638051 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001764770 |
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| Protein GI | 170732823 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.780813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGATA TCCACGATAT TGAATCGTCC GCGCCTGCCG TGCAGGCAGC GCGTGCCGAC
GATGCGCCGG AGCAGGATGC TTCGGCCGCG GGTGGCGACG AGCGTCCCCG CCGCGGTCTG
CGGCGCGGCC CGCGTAGCCT GATCGCGCGG CGTCGCGCGG CGGCCAAGTC GAAGGGCGCC
GAAGGCGAGC AGCCGGGTGC CGAGGGCGCG GATGCGCAGC CGGCCGAGGC TGCCGACGCG
CAGCCGGCGC GTGCGCCGCG CAAGGAAGGC GCGGCCAAGG GCGGTCGCAA GCCGGCCGGC
AAGCGCGAAG GCGCGGCGGC GGCCAAGGGC GGCCAGGCTG GCCAGGGCCG TCGCGGTGCG
GCGAAGACTG AAGGTGGCCC GGCGAAGGTA GCGGAAGGCG ATGCGTCCCA GGACGAACTG
TTCGCATACG TGACGTCGCC GGCCTTCGAC GCGGACAACT CCGCGGGCGG CAGCGGCGTG
CGTGCGCCGA TGCTGCGCCG CGGCCGCGCC CAGCCGGCCA ACAAGCGCGT GCTGTCGCCG
GACGACGACG CGCCGAAGCT CCACAAGGTG CTCGCGGAAG CGGGCATGGG GTCGCGCCGC
GAAATGGAAG AGTTGATCGT CGCCGGCCGC GTGTCGGTGA ACGGCGAGCC CGCGCACATC
GGCCAGCGGA TCATGCCGAC CGACCAAGTG CGGATCAACG GCAAGCCGGT CAAGCGCAAG
CTGCCGAACA AGCCGCCGCG CGTGCTGCTG TATCACAAGC CGACGGGCGA AATTGTCAGC
CACGCGGATC CGGAAGGCCG TCCGTCGGTG TTCGACCGTC TGCCGCCGAT GAAGACGGCG
AAATGGCTTG CGGTGGGTCG TCTCGACTTC AATACCGAAG GTCTGCTGAT GTTGACGACT
TCCGGTGATC TCGCGAACCG CTTCATGCAT CCGCGTTACA GCGTCGAGCG CGAGTATGCG
GTTCGCGTCG TCGGCGAGCT GGCCGAAGGC ATGCGGCAGA AGCTGCTGCA CGGCGTCGAG
CTCGACGACG GTCCAGCGAA TTTCCTGCGC ATCCGCGATG GCGGCGGCGA AGGTACGAAC
CACTGGTATC ACGTCGCGCT GGCCGAGGGC CGCAACCGCG AAGTGCGCCG CATGTTCGAG
GCGGTCGGCC TGATGGTGAG CCGGCTGATC CGTACGCGTC ACGGCCCGAT TCCGCTGCCG
CGCGGCCTGA AGCGTGGTCG TTGGGAGGAG CTCGACGACG CACAGGTGCG CAAGCTGATG
GCGACCGTCG GCCTGAAGGC GCCGTCCGAG GAGAAGGGCA AGCGCGGTGG CGCTGCCGGT
CCGACCGAAC GTCGCCAGCC CGATCCGATG CAGACGTCGA TGGGCTTCAT CAGCCGCGAG
CCGGTGCTGA CGACGCACGG GCAACTCGAC CAGCCGCGTC GCGGCGGTGG CCGACGCGGC
GGGCCGGGCT TGCCGGGCCT GAGCGGCTAC GGCAGCTTGC CGGTTGCGCC GTCGGGTTAC
GGCAACCGCG CGGGCGGCGG CCGTGACGGC AATCGTACCG GCGGTGGCCG CGACGGCAAC
CGTGCAGGCG GCGGTCGCGA TGTCGACGGC AATCGCGCAT CGTACGGCGC AGGCCCCAAG
CGCGAGGGCG CGGGCGGCAA GCGCGGCGGC AGCAAGGGCG GCGGCAATCG CAATCCGAAC
GGCAATCGTG CCGATGGCGC CGGCAACGGT GGCCCGCGCG GCGGTCAGCG TCCGCAGCGC
AGTCGTACAC GCAGCCGCTA A
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| Protein sequence | MTDIHDIESS APAVQAARAD DAPEQDASAA GGDERPRRGL RRGPRSLIAR RRAAAKSKGA
EGEQPGAEGA DAQPAEAADA QPARAPRKEG AAKGGRKPAG KREGAAAAKG GQAGQGRRGA
AKTEGGPAKV AEGDASQDEL FAYVTSPAFD ADNSAGGSGV RAPMLRRGRA QPANKRVLSP
DDDAPKLHKV LAEAGMGSRR EMEELIVAGR VSVNGEPAHI GQRIMPTDQV RINGKPVKRK
LPNKPPRVLL YHKPTGEIVS HADPEGRPSV FDRLPPMKTA KWLAVGRLDF NTEGLLMLTT
SGDLANRFMH PRYSVEREYA VRVVGELAEG MRQKLLHGVE LDDGPANFLR IRDGGGEGTN
HWYHVALAEG RNREVRRMFE AVGLMVSRLI RTRHGPIPLP RGLKRGRWEE LDDAQVRKLM
ATVGLKAPSE EKGKRGGAAG PTERRQPDPM QTSMGFISRE PVLTTHGQLD QPRRGGGRRG
GPGLPGLSGY GSLPVAPSGY GNRAGGGRDG NRTGGGRDGN RAGGGRDVDG NRASYGAGPK
REGAGGKRGG SKGGGNRNPN GNRADGAGNG GPRGGQRPQR SRTRSR
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