Gene Bcenmc03_1451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1451 
Symbol 
ID6123129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1604618 
End bp1606855 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content68% 
IMG OID641638027 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_001764748 
Protein GI170732801 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00161513 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CCGTTTCCGC CTCTCCCGTC GCGGCGCCGT CGTTCGACGA CGTGCTCGCG 
TTCGTGCGCG AGCGGGCCGG CGACGCGCGC CTGTCGTCCG GCGAGCTGCT CGCCGATCAC
TCGGCGGGCA CGGCGGCGAT CATGCGCACG CTGAACGTCG ATCCGCACGC AATGCAGGCC
GCCGCGCTGT TCGTGCTGAC GCCGCACCTG AGCGACCCCG AGCGTGAGCT GACCGAGCGT
TTCGGCGACG AAGTCGCGCG GCTCGTGTCC GACGTGCGCA AGCTGTTGCG GCTCGGCACC
GTCGGCCTGC GCGCCGCGCA GAATGCCGCG AAGCCCGACT CCGGGCGCGA CGCGGCGGAA
GAGCGGCGCA CGCAGATCGA GGCGCTGCGC AAGATGCTGC TCGCCTTCGC GCAGGACATC
CGCGTGGTGC TGATCCGGCT CGCGTCGCGG TTGCAGTCGC TGCGCTACTA CGCGGCCGCG
AAGCTCGATC CGCCGCCCGA CGTCGCGCGC GAGACGCTCG AGATCTATGC GCCGCTCGCG
AACCGTCTCG GTATCTGGCA ACTGAAGTGG GAGCTCGAGG ATCTCGCGTT CCGCTTCGAG
GATCCCGTCA CCTACAAGCG GATCGCGAAG CTGCTCGACG AGAAGCGCAT CGAGCGCGAG
GCGTACGTCA CGCAGGCGAT CGCGCGGCTG CAGCACGAGC TCGCGCAAGC GCACATCCAG
GCCGACGTGA GCGGCCGGCC GAAGCATATC TACAGCATCT GGCGCAAGAT GCGCGGCAAG
GAGCTCGACT TCTCCGAGCT GTACGACGTG CGCGCGTTTC GCGTGATCGT GCCCGACATC
AAGGATTGCT ACGCGGTGCT GGGCATCGTG CATCACCTGT GGCAGCCGGT GCCGAAGGAA
TTCGACGACT ACATCTCGCG GCCGAAGCCG AACGGCTACA AGTCGCTGCA TACGGTCGTG
ATCGGCGACG ACGGCCGTGC GTTCGAAGTG CAGATCCGCA CGCAGGAGAT GCATCGTTTC
GCCGAGTACG GCGTCGCCGC GCACTGGCGT TACAAGGAGG CCGGCGCGCG CGGCTACGGC
GGCCAGTTCT CCGCGAGCGA CAAGTACGAC GAGAAGATCG CGTGGCTGCG CCAGTTGCTC
GCGTGGAAGG ACGACGTCGA GGATGGCACC GAAGTGTCGG GCGACCAGGC GTGGGCGCAA
TTGCGCGAGA CGTCGCTCGA CGACGACCAC ATCTACGTGC TGACGCCGCA GGCGCGCGTG
ATCGCGCTGC CGCAGGGCGC GACGCCGGTC GATTTCGCGT ATCACCTGCA CAGCGAGCTC
GGCCATCGCT GCCGTGGCGC GCGCGTCGAC GGCGTGATGG TGCCGCTGAA CACGTCGCTG
GCGAACGGCC AGACGGTCGA GATCGTCGCG GTGAAGGAAG GCGGGCCGTC GCGCGACTGG
CTGAACCTGC AGCTCGGTTA CCTGAAGAGC TCGCGCGCGC GGCAGAAGGT GCGTGCGTGG
TTCAACTCGA TCGAGCAGGA AGAAAACGTC GCGCACGGGC GCGCGCTCGT CGAAAAGACG
CTGCAGCGCG AGGGCAAGAC GTCGGTCAAC CTGGACAACC TCGCCGCGAA GCTCGGCTTC
AAGTCACCCG AGGAGTTGTT CTCGGTCGTC GGCAAGGAAG AGTTCAGCCT GCGCAACGTC
GAGCACGCGC TGTCCGATGC GCCGCCGCCC GAACCGGCGC CCGAGGCGCC GGCCGATTTC
GAGAAGCGCA GCAGCGGCGC GAGCGTCGCG CACGGCGCGT CGACCGGCGT GCTGGTGGTG
GGCGTCGACG CGCTGCTGAC GCAGTTGGCG CGCTGCTGCC GTCCGGCGCC GCCCGATCCG
ATCAGCGGTT TCGTCACGCG CGGCAAGGGG ATGTCGATCC ACCGCACCGA TTGTCCGACG
TTTCGCCGGA TGGTCGAGCG CGCGCCGGAG CGCGTGCTGC AGACGACCTG GTCGGCCGAC
GTGCTGGGCG GGCGCGGCGC GTCCGTGTAT CCGGTCGACC TGATGATCGA GGCGAGCGAC
CGGCAAGGGC TGCTGCGCGA TATCTCCGAA GTGTTCGCGC GCGAAAAGAT CAATGTCGTG
GGCGTGAAGA CGCAGAGTCG CCGCAATGCG GCATTCATGC AGTTCACGGT CGAGGTATCG
AATTCGGCGC AGGTGCAGCG CGCGTGCACG CTGCTCGGCG AGGTGCAGGG CGTCGTGCGG
GCAGGGCGGA AATCGTGA
 
Protein sequence
MTESVSASPV AAPSFDDVLA FVRERAGDAR LSSGELLADH SAGTAAIMRT LNVDPHAMQA 
AALFVLTPHL SDPERELTER FGDEVARLVS DVRKLLRLGT VGLRAAQNAA KPDSGRDAAE
ERRTQIEALR KMLLAFAQDI RVVLIRLASR LQSLRYYAAA KLDPPPDVAR ETLEIYAPLA
NRLGIWQLKW ELEDLAFRFE DPVTYKRIAK LLDEKRIERE AYVTQAIARL QHELAQAHIQ
ADVSGRPKHI YSIWRKMRGK ELDFSELYDV RAFRVIVPDI KDCYAVLGIV HHLWQPVPKE
FDDYISRPKP NGYKSLHTVV IGDDGRAFEV QIRTQEMHRF AEYGVAAHWR YKEAGARGYG
GQFSASDKYD EKIAWLRQLL AWKDDVEDGT EVSGDQAWAQ LRETSLDDDH IYVLTPQARV
IALPQGATPV DFAYHLHSEL GHRCRGARVD GVMVPLNTSL ANGQTVEIVA VKEGGPSRDW
LNLQLGYLKS SRARQKVRAW FNSIEQEENV AHGRALVEKT LQREGKTSVN LDNLAAKLGF
KSPEELFSVV GKEEFSLRNV EHALSDAPPP EPAPEAPADF EKRSSGASVA HGASTGVLVV
GVDALLTQLA RCCRPAPPDP ISGFVTRGKG MSIHRTDCPT FRRMVERAPE RVLQTTWSAD
VLGGRGASVY PVDLMIEASD RQGLLRDISE VFAREKINVV GVKTQSRRNA AFMQFTVEVS
NSAQVQRACT LLGEVQGVVR AGRKS