Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1451 |
Symbol | |
ID | 6123129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1604618 |
End bp | 1606855 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638027 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001764748 |
Protein GI | 170732801 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00161513 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT CCGTTTCCGC CTCTCCCGTC GCGGCGCCGT CGTTCGACGA CGTGCTCGCG TTCGTGCGCG AGCGGGCCGG CGACGCGCGC CTGTCGTCCG GCGAGCTGCT CGCCGATCAC TCGGCGGGCA CGGCGGCGAT CATGCGCACG CTGAACGTCG ATCCGCACGC AATGCAGGCC GCCGCGCTGT TCGTGCTGAC GCCGCACCTG AGCGACCCCG AGCGTGAGCT GACCGAGCGT TTCGGCGACG AAGTCGCGCG GCTCGTGTCC GACGTGCGCA AGCTGTTGCG GCTCGGCACC GTCGGCCTGC GCGCCGCGCA GAATGCCGCG AAGCCCGACT CCGGGCGCGA CGCGGCGGAA GAGCGGCGCA CGCAGATCGA GGCGCTGCGC AAGATGCTGC TCGCCTTCGC GCAGGACATC CGCGTGGTGC TGATCCGGCT CGCGTCGCGG TTGCAGTCGC TGCGCTACTA CGCGGCCGCG AAGCTCGATC CGCCGCCCGA CGTCGCGCGC GAGACGCTCG AGATCTATGC GCCGCTCGCG AACCGTCTCG GTATCTGGCA ACTGAAGTGG GAGCTCGAGG ATCTCGCGTT CCGCTTCGAG GATCCCGTCA CCTACAAGCG GATCGCGAAG CTGCTCGACG AGAAGCGCAT CGAGCGCGAG GCGTACGTCA CGCAGGCGAT CGCGCGGCTG CAGCACGAGC TCGCGCAAGC GCACATCCAG GCCGACGTGA GCGGCCGGCC GAAGCATATC TACAGCATCT GGCGCAAGAT GCGCGGCAAG GAGCTCGACT TCTCCGAGCT GTACGACGTG CGCGCGTTTC GCGTGATCGT GCCCGACATC AAGGATTGCT ACGCGGTGCT GGGCATCGTG CATCACCTGT GGCAGCCGGT GCCGAAGGAA TTCGACGACT ACATCTCGCG GCCGAAGCCG AACGGCTACA AGTCGCTGCA TACGGTCGTG ATCGGCGACG ACGGCCGTGC GTTCGAAGTG CAGATCCGCA CGCAGGAGAT GCATCGTTTC GCCGAGTACG GCGTCGCCGC GCACTGGCGT TACAAGGAGG CCGGCGCGCG CGGCTACGGC GGCCAGTTCT CCGCGAGCGA CAAGTACGAC GAGAAGATCG CGTGGCTGCG CCAGTTGCTC GCGTGGAAGG ACGACGTCGA GGATGGCACC GAAGTGTCGG GCGACCAGGC GTGGGCGCAA TTGCGCGAGA CGTCGCTCGA CGACGACCAC ATCTACGTGC TGACGCCGCA GGCGCGCGTG ATCGCGCTGC CGCAGGGCGC GACGCCGGTC GATTTCGCGT ATCACCTGCA CAGCGAGCTC GGCCATCGCT GCCGTGGCGC GCGCGTCGAC GGCGTGATGG TGCCGCTGAA CACGTCGCTG GCGAACGGCC AGACGGTCGA GATCGTCGCG GTGAAGGAAG GCGGGCCGTC GCGCGACTGG CTGAACCTGC AGCTCGGTTA CCTGAAGAGC TCGCGCGCGC GGCAGAAGGT GCGTGCGTGG TTCAACTCGA TCGAGCAGGA AGAAAACGTC GCGCACGGGC GCGCGCTCGT CGAAAAGACG CTGCAGCGCG AGGGCAAGAC GTCGGTCAAC CTGGACAACC TCGCCGCGAA GCTCGGCTTC AAGTCACCCG AGGAGTTGTT CTCGGTCGTC GGCAAGGAAG AGTTCAGCCT GCGCAACGTC GAGCACGCGC TGTCCGATGC GCCGCCGCCC GAACCGGCGC CCGAGGCGCC GGCCGATTTC GAGAAGCGCA GCAGCGGCGC GAGCGTCGCG CACGGCGCGT CGACCGGCGT GCTGGTGGTG GGCGTCGACG CGCTGCTGAC GCAGTTGGCG CGCTGCTGCC GTCCGGCGCC GCCCGATCCG ATCAGCGGTT TCGTCACGCG CGGCAAGGGG ATGTCGATCC ACCGCACCGA TTGTCCGACG TTTCGCCGGA TGGTCGAGCG CGCGCCGGAG CGCGTGCTGC AGACGACCTG GTCGGCCGAC GTGCTGGGCG GGCGCGGCGC GTCCGTGTAT CCGGTCGACC TGATGATCGA GGCGAGCGAC CGGCAAGGGC TGCTGCGCGA TATCTCCGAA GTGTTCGCGC GCGAAAAGAT CAATGTCGTG GGCGTGAAGA CGCAGAGTCG CCGCAATGCG GCATTCATGC AGTTCACGGT CGAGGTATCG AATTCGGCGC AGGTGCAGCG CGCGTGCACG CTGCTCGGCG AGGTGCAGGG CGTCGTGCGG GCAGGGCGGA AATCGTGA
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Protein sequence | MTESVSASPV AAPSFDDVLA FVRERAGDAR LSSGELLADH SAGTAAIMRT LNVDPHAMQA AALFVLTPHL SDPERELTER FGDEVARLVS DVRKLLRLGT VGLRAAQNAA KPDSGRDAAE ERRTQIEALR KMLLAFAQDI RVVLIRLASR LQSLRYYAAA KLDPPPDVAR ETLEIYAPLA NRLGIWQLKW ELEDLAFRFE DPVTYKRIAK LLDEKRIERE AYVTQAIARL QHELAQAHIQ ADVSGRPKHI YSIWRKMRGK ELDFSELYDV RAFRVIVPDI KDCYAVLGIV HHLWQPVPKE FDDYISRPKP NGYKSLHTVV IGDDGRAFEV QIRTQEMHRF AEYGVAAHWR YKEAGARGYG GQFSASDKYD EKIAWLRQLL AWKDDVEDGT EVSGDQAWAQ LRETSLDDDH IYVLTPQARV IALPQGATPV DFAYHLHSEL GHRCRGARVD GVMVPLNTSL ANGQTVEIVA VKEGGPSRDW LNLQLGYLKS SRARQKVRAW FNSIEQEENV AHGRALVEKT LQREGKTSVN LDNLAAKLGF KSPEELFSVV GKEEFSLRNV EHALSDAPPP EPAPEAPADF EKRSSGASVA HGASTGVLVV GVDALLTQLA RCCRPAPPDP ISGFVTRGKG MSIHRTDCPT FRRMVERAPE RVLQTTWSAD VLGGRGASVY PVDLMIEASD RQGLLRDISE VFAREKINVV GVKTQSRRNA AFMQFTVEVS NSAQVQRACT LLGEVQGVVR AGRKS
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