Gene Bcenmc03_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1337 
Symbol 
ID6123015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1475582 
End bp1476808 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content69% 
IMG OID641637913 
Productlytic transglycosylase catalytic 
Protein accessionYP_001764634 
Protein GI170732687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.545884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0328335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTC ATACCACTCG CCTGTTCGGC CGCCACGCGC TGCCCTTCGC CTCGACGATC 
GCGCTCGCGT GCGCGCTCTG CGGCGTCGCG CGGGCCGATT GCCTGGACGA CGCGGCCGCG
TTCCAGCACG TCAGCGTCGC CCTGATGCGC GGCATCGCGC AAGTCGAATC GGGGATGAAT
CCGAACGCCG TCAACACGAA TACCAACGGC ACGGTCGACA TCGGGCTGAT GCAGATCAAC
AGCACGTGGC TGCCGACGCT CGCACGCGAA GGCATCACGC GGGAGAGCCT GTTCGATGCG
TGCACGAACG CATACGTCGG TGCGTGGATC CTGTCGCAGA ACATCCGCCA GCTCGGCCCC
AACTGGAACG CGATCGGCGC GTACAACTCC GCGTCGCCCG ACAAGCGCCT CGCCTATGCG
CGCAAGGTCT ATGATGCAAT CCGGACCATG CCGGATTCGC CGGATACTCC CATGCCCATC
CTTCCACCCT CCTTCACGCC GCCGCAACAG GCACAGACGT ACAACCCGTT CGCGAGCCTG
AGCGTGTCGG CGCCGCCCGT CACGCGCGCA CGGACGATCT CGCCGGCCTC GCCGCCGGCG
CCGCCGCAGG GGGGCCCCGC CGGCCCGGCC GGTACGTACA ACTTCGGATG GACGGTCACC
GGCGCCGATC AGGCCAAGCC GACCCAGGTG TTCGATGACG GTGCGCGGGT CTACGTGCAG
TTCAGCGACA TGAAGCACGT GCCGGCGATC TTCACCGAGA CGTCGGCCGG GCGCGTGCTG
ATGTCGTGGG AGCTGCAGTT TCCCTATGCC GTCGTGACGC GTCCCGCGCA AACGTTGATC
TTCCAGCTCG GGCCGTTCGA AGCGCGCGCG CAGCGCAGTG CGGCGGCCGC AGGCATGACC
GCGCAGGCCG GGACGGCGGG CACGGCGACG GTCGGCGCAT CGGCCCCGGC ATCGAAGAAG
CCGGCCGGTG CGGCAGCGAA TGCCGCGACG AACACGGCAG CCAACACGAC CGCGAAACGC
ACGGCCTCGG CCGATGCGCT GTGGTACGTG AATACGCCGT CCACGTCGGG AACGGCGGCG
GCCTCGCCTT CGACCGCGAA TATTCCCGCC ACGCTGCCGA CGGCCATTAC GTCGAACACG
CCGCCACCCT CGTCGGCTCA AGCACCGGCC GCGGCCGCTC AGCCGTCGCG CGCCAGCGCC
GACGCGCTGT GGTACATCTC GAAGTAA
 
Protein sequence
MPRHTTRLFG RHALPFASTI ALACALCGVA RADCLDDAAA FQHVSVALMR GIAQVESGMN 
PNAVNTNTNG TVDIGLMQIN STWLPTLARE GITRESLFDA CTNAYVGAWI LSQNIRQLGP
NWNAIGAYNS ASPDKRLAYA RKVYDAIRTM PDSPDTPMPI LPPSFTPPQQ AQTYNPFASL
SVSAPPVTRA RTISPASPPA PPQGGPAGPA GTYNFGWTVT GADQAKPTQV FDDGARVYVQ
FSDMKHVPAI FTETSAGRVL MSWELQFPYA VVTRPAQTLI FQLGPFEARA QRSAAAAGMT
AQAGTAGTAT VGASAPASKK PAGAAANAAT NTAANTTAKR TASADALWYV NTPSTSGTAA
ASPSTANIPA TLPTAITSNT PPPSSAQAPA AAAQPSRASA DALWYISK