Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1337 |
Symbol | |
ID | 6123015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1475582 |
End bp | 1476808 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641637913 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001764634 |
Protein GI | 170732687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.545884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0328335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTC ATACCACTCG CCTGTTCGGC CGCCACGCGC TGCCCTTCGC CTCGACGATC GCGCTCGCGT GCGCGCTCTG CGGCGTCGCG CGGGCCGATT GCCTGGACGA CGCGGCCGCG TTCCAGCACG TCAGCGTCGC CCTGATGCGC GGCATCGCGC AAGTCGAATC GGGGATGAAT CCGAACGCCG TCAACACGAA TACCAACGGC ACGGTCGACA TCGGGCTGAT GCAGATCAAC AGCACGTGGC TGCCGACGCT CGCACGCGAA GGCATCACGC GGGAGAGCCT GTTCGATGCG TGCACGAACG CATACGTCGG TGCGTGGATC CTGTCGCAGA ACATCCGCCA GCTCGGCCCC AACTGGAACG CGATCGGCGC GTACAACTCC GCGTCGCCCG ACAAGCGCCT CGCCTATGCG CGCAAGGTCT ATGATGCAAT CCGGACCATG CCGGATTCGC CGGATACTCC CATGCCCATC CTTCCACCCT CCTTCACGCC GCCGCAACAG GCACAGACGT ACAACCCGTT CGCGAGCCTG AGCGTGTCGG CGCCGCCCGT CACGCGCGCA CGGACGATCT CGCCGGCCTC GCCGCCGGCG CCGCCGCAGG GGGGCCCCGC CGGCCCGGCC GGTACGTACA ACTTCGGATG GACGGTCACC GGCGCCGATC AGGCCAAGCC GACCCAGGTG TTCGATGACG GTGCGCGGGT CTACGTGCAG TTCAGCGACA TGAAGCACGT GCCGGCGATC TTCACCGAGA CGTCGGCCGG GCGCGTGCTG ATGTCGTGGG AGCTGCAGTT TCCCTATGCC GTCGTGACGC GTCCCGCGCA AACGTTGATC TTCCAGCTCG GGCCGTTCGA AGCGCGCGCG CAGCGCAGTG CGGCGGCCGC AGGCATGACC GCGCAGGCCG GGACGGCGGG CACGGCGACG GTCGGCGCAT CGGCCCCGGC ATCGAAGAAG CCGGCCGGTG CGGCAGCGAA TGCCGCGACG AACACGGCAG CCAACACGAC CGCGAAACGC ACGGCCTCGG CCGATGCGCT GTGGTACGTG AATACGCCGT CCACGTCGGG AACGGCGGCG GCCTCGCCTT CGACCGCGAA TATTCCCGCC ACGCTGCCGA CGGCCATTAC GTCGAACACG CCGCCACCCT CGTCGGCTCA AGCACCGGCC GCGGCCGCTC AGCCGTCGCG CGCCAGCGCC GACGCGCTGT GGTACATCTC GAAGTAA
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Protein sequence | MPRHTTRLFG RHALPFASTI ALACALCGVA RADCLDDAAA FQHVSVALMR GIAQVESGMN PNAVNTNTNG TVDIGLMQIN STWLPTLARE GITRESLFDA CTNAYVGAWI LSQNIRQLGP NWNAIGAYNS ASPDKRLAYA RKVYDAIRTM PDSPDTPMPI LPPSFTPPQQ AQTYNPFASL SVSAPPVTRA RTISPASPPA PPQGGPAGPA GTYNFGWTVT GADQAKPTQV FDDGARVYVQ FSDMKHVPAI FTETSAGRVL MSWELQFPYA VVTRPAQTLI FQLGPFEARA QRSAAAAGMT AQAGTAGTAT VGASAPASKK PAGAAANAAT NTAANTTAKR TASADALWYV NTPSTSGTAA ASPSTANIPA TLPTAITSNT PPPSSAQAPA AAAQPSRASA DALWYISK
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