Gene Bcenmc03_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1293 
Symbol 
ID6122971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1417545 
End bp1418351 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID641637868 
Productputative hemolysin-like protein 
Protein accessionYP_001764590 
Protein GI170732643 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.418328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGAAC TGCCGACGCC TACGCTCCCT TTTGCCTCGC TGCCCCTCGA CACGTCGCGA 
CGCCACCTGC CGCGCGCCAG TGAAACCGTC ACATCGGAGT ATCGCCTGCG CGCCGCATGG
GCGCGTACGG AAGACGAATT GCGCGAAGCC CAGCGCCTGC GCTACAGCGT GTTCGCCGAA
GAGATGGGCG CGCAGGTCAG CGGCCCGTCC GGTCTCGATG TCGATCCGTT CGACGTGTAT
TGCGACCACC TGCTGGTCCG CGATCTCGAC ACGCTGAAAG TCGTCGGTAC GTACCGCGTG
CTGCCGCCGC ACCAGGCGGC GCGTGTCGGC CGCCTGTACG CCGAAGGCGA ATTCGATCTG
TCGCGCCTCA CGCACCTGCG CGGCAAGATG GTCGAGGTCG GCCGCTCGTG CGTGCACAGC
GACTACCGCA GCGGCGCCGT CATCATGGCG CTGTGGGGCG GCCTGGGCGC GTACATGATG
CAGAACGGCT ACGAGACGAT GCTCGGCTGC GCGAGCGTGT CGATGGCCGA CGGCGGCCAC
TACGCGGCGA ACCTGTACCA GTCGCTGTCG GCGGGCTCGC TGACGGCGCC CGAGTATCGC
GCATTCCCGC ACACGGCCCT GCCGGTCGAT GAACTGCAGA CGGGCACCGT CGTCGCACCG
CCGCCGCTGA TCAAGGGTTA CCTGCGTCTC GGCGCGAAGA TTTGCGGCGC CCCGGCCTGG
GATCCCGATT TCAACTGCGC GGATTTCCTG ACGCTGTTCC GTCTGTCGGA CATCAACGCG
CGCTACGCCC GCCACTTCCT GGGCTGA
 
Protein sequence
MRELPTPTLP FASLPLDTSR RHLPRASETV TSEYRLRAAW ARTEDELREA QRLRYSVFAE 
EMGAQVSGPS GLDVDPFDVY CDHLLVRDLD TLKVVGTYRV LPPHQAARVG RLYAEGEFDL
SRLTHLRGKM VEVGRSCVHS DYRSGAVIMA LWGGLGAYMM QNGYETMLGC ASVSMADGGH
YAANLYQSLS AGSLTAPEYR AFPHTALPVD ELQTGTVVAP PPLIKGYLRL GAKICGAPAW
DPDFNCADFL TLFRLSDINA RYARHFLG