Gene Bcenmc03_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1262 
Symbol 
ID6122940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1383097 
End bp1383756 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID641637836 
Productleucine export protein LeuE 
Protein accessionYP_001764559 
Protein GI170732612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00908947 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.254179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCC ACGCACTCGG CATCACGGAT ATCTGGACCT ACGTGTTCGG CGTGATCTTC 
ATCATCCTGC TGCCGGGGCC GAACTCGATG TACGTGCTGT CGCTCGCCGC GCAGCGCGGC
GTGAAGGCCG GCTATCGCGC GGCCTGCGGC GTGTTCGTCG GCGATACCGT GCTGATGGTG
CTGTCCGCCG CGGGCGTCGC GTCGCTGCTG AAGGCGAACC CGCTGCTGTT CTCCGTCGTC
AAGTACGGCG GCGCCGCGTA CCTGCTGTAC ATCGGCACCG GGATGCTGCG CAGCGCGTGG
CGCAAGCTGC GCGCGCGCGG CGACGCGCCG GTCGAGGCGC CGCAGGCGGT CGACGGCGAG
CGGCCGCTCC GGAAAGCGCT GATCGTGAGC CTGCTGAATC CGAAGGCCAT CCTGTTCTTC
ATCTCGTTCT TCATCCAGTT CGTCGACCCG GCATTCCCGC ATCCCGCGCT GTCGTTCGTC
GTGCTCGGGG CGATCGCGCA ATGCGCGAGC TTCCTCTACC TGAGCACGCT GATCTTCGCG
GGCGCGCGGC TCGCCGAGCA CTTTCGCCGC CGCCGCAAGC TCGCGGCAGG CGCGGCGAGC
AGCGTGGGCG GCCTGTTCAT CGGTTTCTCG GTGAAGCTGG CGCTCGCGAC CATGAGCTGA
 
Protein sequence
MFGHALGITD IWTYVFGVIF IILLPGPNSM YVLSLAAQRG VKAGYRAACG VFVGDTVLMV 
LSAAGVASLL KANPLLFSVV KYGGAAYLLY IGTGMLRSAW RKLRARGDAP VEAPQAVDGE
RPLRKALIVS LLNPKAILFF ISFFIQFVDP AFPHPALSFV VLGAIAQCAS FLYLSTLIFA
GARLAEHFRR RRKLAAGAAS SVGGLFIGFS VKLALATMS