| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1260 |
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| Symbol | |
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| ID | 6122938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 1380330 |
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| End bp | 1381547 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641637834 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001764557 |
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| Protein GI | 170732610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00393517 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0788656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGG TGCAGGTGAG GGTGCTCGCG CTGTTTTCGG TCGGGTATTT CGTGTCGTAT
GTGTTTCGCG GCGTCAATCT GGGCTTCGCG CCGTTCGTCA CGCATGAACT CGGGTTGTCG
GCCGCCGATC TCGGCTTGCT CACCAGCCTC TATTTCCTCG GCTTCGCGGG CGCGCAGATC
CCGGCCGGCG TGATGCTCGA CCACTTCGGC CCGCGGCGCG TGACGGCCGG CATGCTGCTG
TTCGCGGCGG CCGGCGCGGC CGTGTTCGGT GCGGCGCATG GCATCGGCAC GATGATGGTC
GGCCGGCTGC TGATCGGCGT CGGCGTATCG GTCTGTCTCG GTGCGGCGTT CAAGGCGCTC
GCGCAGCATT TCCCGGTTGG CCGGCTGCCG CTCGTCAACG GCCTCGTGAT GGCCGTGGGC
GGCCTCGGCG GCGTGATGGT CGGCTCGCCG TTGACCTGGC TGCTCGGCTG GGCGAGCTGG
CGCGCGATCT GTTTCGGCCT CGCGGTGCTG ACCGTGGCCG TCGCGGCGTC GATCGGCTTC
GGGGCGCCCG ACGCGCAGCA GGCGCGTCAC CAGGGCGGCC TCGTCAGCCA GTTCAAGGGC
ACGTGGCACA TCCTGACGAG CCGGGCGTTC TGGAAGATTG CGTCGTTCTC CGTCGTCACG
CAGGGCGTGT TCTATGCGAT GCAGTCGCTG TGGGTGGGCC CGTATCTGCG GGATGTCGGC
GGATTCGACG CGCCGCATGC CGCGCGCCTC GTGTCGGTGC TCGGCTTCGC GATGATGGCC
GGCTGCGTCG GCTTCGGCGC GGCGGCGCGC GTGCTCGAGC GGCGCGGCGT GTCGGTCTAC
GCGACTTGCG GCATCGGCAT GGCGCTGTTC GTTGCGACGC AACTCGCGAT CGTCGCGCGC
GTGCCGTTGC CGCCGGCCGT GCTGTGGGCC GCCTACGGGA TGTTCGGCGG CGTGGGCATC
CTCACCTACG CGGTGATGGC CGGCCACTTT CCCGCTCATC TGATCGGTCG CGCGAACACG
ACGCTCACGC TCGTGATCTT CCTGCTGATC TTCGTGTTCC AGATCGGCGT CGGCGCCGTG
TTGTCGCACT GGCCGGCGGT CGACGGCCGT TATCCGGCCG CCGCGCACTT CACCGCCTGG
GGCGTGCTGC TCGCGCTGCA ACTCGCGAGC GCGGTCTGGT ACGTCTGGCC TGCGCGCGGC
GCTGGCCAAG CGCACTGA
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| Protein sequence | MSSVQVRVLA LFSVGYFVSY VFRGVNLGFA PFVTHELGLS AADLGLLTSL YFLGFAGAQI
PAGVMLDHFG PRRVTAGMLL FAAAGAAVFG AAHGIGTMMV GRLLIGVGVS VCLGAAFKAL
AQHFPVGRLP LVNGLVMAVG GLGGVMVGSP LTWLLGWASW RAICFGLAVL TVAVAASIGF
GAPDAQQARH QGGLVSQFKG TWHILTSRAF WKIASFSVVT QGVFYAMQSL WVGPYLRDVG
GFDAPHAARL VSVLGFAMMA GCVGFGAAAR VLERRGVSVY ATCGIGMALF VATQLAIVAR
VPLPPAVLWA AYGMFGGVGI LTYAVMAGHF PAHLIGRANT TLTLVIFLLI FVFQIGVGAV
LSHWPAVDGR YPAAAHFTAW GVLLALQLAS AVWYVWPARG AGQAH
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