| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1216 |
|---|
| Symbol | |
|---|
| ID | 6122894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1336483 |
|---|
| End bp | 1337715 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641637790 |
|---|
| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
|---|
| Protein accession | YP_001764513 |
|---|
| Protein GI | 170732566 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT CAGAGCCATT GCGTCTGCAT GTGCCGGAGC CCACCGGGCG CCCGGGCTGC
AAGACGGACT TTTCCTATCT GCATCTATCG CCGGCTGGCG CCGTGCGCCG CCCACCGATC
GACGTTGCCG CGGCGGACAC CGCCGATCTC GCCCGCAGCC TCGTGCGCGT GCTCGACGAC
AACGGCAAGG CCGTCGGCCC GTGGGCCCCC GATCTCGACG ATGCGCGGCT GATCGCCGGG
CTGCGCGCGA TGCTCAAGAC CCGCATTTTC GACGCGCGCA TGATGATCGC GCAGCGTCAG
AAGAAAATCT CCTTCTACAT GTTGAGCCTC GGCGAAGAGG CGATCGGCAC CGCGCACGCG
ATGGCGCTGC GCGACGGCGA CATGTGCTTT CCGACCTACC GGCAGCAGAG CATCCTGATC
GCGCGCGACG TGCCGCTCGA GCGGATGATC TGCCAGCTGA TGTCGAACGA AGGCGATCCG
CTGAAGGGCC GCCAGCTCCC GGTGATGTAC TCGGACCGCG AAGCCGGCTT CTTCTCGATT
TCCGGCAATC TCGCGACGCA GTTCATCCAG GCGGTCGGCT GGGCGATGGC GTCGGCGATC
AAGGGCGACA CGAAGATCGC ATCCGCATGG ATCGGCGACG GCGCGACGGC CGAAGCCGAT
TTCCACACCG CGCTCACGTT CGCGCATGTG TACCGCGCGC CGGTCGTGCT GAACGTGGTC
AACAACCAGT GGGCGATCTC GACGTTCCAG GCGATCGCGG GCGGCGAGGG CACGACCTTC
GCCGGGCGCG GCGTCGGCTG CGGGATCGCG TCGCTACGCG TCGACGGCAA CGACTTCCTC
GCGATCTACG CGGCGTCGAG CTGGGCGGCC GAACGCGCGC GCCGCAATCT CGGCCCGACG
CTGATCGAGT GGGTGACCTA TCGCGCGGGC GCGCATTCGA CGTCGGACGA TCCGACCAAG
TACCGGCCGA GCGACGACTG GTCCCATTTC CCGCTGGGCG ATCCGATCGA GCGCTTCAAG
CGCCACCTGA TCGTGAAGGG CATCTGGTCG GACAGCGCGC ACGACGCGTT GACGGCCGAG
CTCGAGGCCG AGGTGATCGC CGCGCAGAAG GAAGCGGAGA AGTACGGGAC GCTGGCCGAC
GACCGGATTC CGTCGCCGGC CTCGATGTTC GACGACGTGT ACAAGGAGCT GCCCGCGCAC
CTGCGCCGTC AGCGCCAGGA ACTGGGAGCG TGA
|
|---|
| Protein sequence | MSLSEPLRLH VPEPTGRPGC KTDFSYLHLS PAGAVRRPPI DVAAADTADL ARSLVRVLDD
NGKAVGPWAP DLDDARLIAG LRAMLKTRIF DARMMIAQRQ KKISFYMLSL GEEAIGTAHA
MALRDGDMCF PTYRQQSILI ARDVPLERMI CQLMSNEGDP LKGRQLPVMY SDREAGFFSI
SGNLATQFIQ AVGWAMASAI KGDTKIASAW IGDGATAEAD FHTALTFAHV YRAPVVLNVV
NNQWAISTFQ AIAGGEGTTF AGRGVGCGIA SLRVDGNDFL AIYAASSWAA ERARRNLGPT
LIEWVTYRAG AHSTSDDPTK YRPSDDWSHF PLGDPIERFK RHLIVKGIWS DSAHDALTAE
LEAEVIAAQK EAEKYGTLAD DRIPSPASMF DDVYKELPAH LRRQRQELGA
|
|---|
| |