Gene Bcenmc03_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1133 
Symbol 
ID6122811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1232383 
End bp1233135 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID641637707 
ProductHAD family hydrolase 
Protein accessionYP_001764430 
Protein GI170732483 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.697962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCG TTCCGGCTTC CCTGTCCCTG ACCGATACCG CGTTCTTCTT CGACTTCGAC 
GGCACGCTCG TCGAACTGGC GCCGACCCCC GACGCCATTC ACGTTCCGCC GTCGCTGCTG
ACGCTGCTCG ACGAATTGTC GCGCCGCTCG CACGGCGCGG TCGCGATCGT GTCCGGGCGC
GGGATCGACA ACCTCGACAC GTTCCTGAAG ATGCCCGGCC TGCCGATCGC CGGCCTGCAC
GGCGCGGAGC GCCGCGATGC GAACGGCGAC ACGCAGCGCA TCGGCTTCAA CGACGAACGC
CTGCTGCGCA TCGAGCGCGA GCTTGCCGGT GTGGTCGACC GCCATCCGGG CATGCTGCTC
GAAATCAAGG GCGCGGCCGT CGCGCTGCAC TTTCGCAATG CGCCCGAGCG CGAGGCGGTG
GCGCGCGAAG CGGCCGAGCG CCTCGTCGCC GACTATGCGG ATGCGTATGT GCTGCAACCC
GGCAAGATGG TGTTCGAGAT CAAGCCGAAG GGCGTCGATA AGGGCCGCGC GCTGGCCGCG
TTCCTCGACG AGCCGCCGTT TGCGGGCCGC GTGCCGCTGT TCGCGGGCGA CGACCTGACC
GACGAGAAGG GCTTCGCGGT GGTCAACGCG CGCGGCGGCC TGTCGATCAA GGTCGGCGCG
GGCGAGACGT CCGCGCGCAT GCGGCTCGAT TCGGTCGACG CGCTGCATGA GCAGATCGCG
GGCTGGCTCG GTGCGGGGCA ACCGCACGCA TGA
 
Protein sequence
MQSVPASLSL TDTAFFFDFD GTLVELAPTP DAIHVPPSLL TLLDELSRRS HGAVAIVSGR 
GIDNLDTFLK MPGLPIAGLH GAERRDANGD TQRIGFNDER LLRIERELAG VVDRHPGMLL
EIKGAAVALH FRNAPEREAV AREAAERLVA DYADAYVLQP GKMVFEIKPK GVDKGRALAA
FLDEPPFAGR VPLFAGDDLT DEKGFAVVNA RGGLSIKVGA GETSARMRLD SVDALHEQIA
GWLGAGQPHA