Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1090 |
Symbol | |
ID | 6122770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 1194495 |
End bp | 1196288 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641637662 |
Product | GTP-binding protein LepA |
Protein accession | YP_001764389 |
Protein GI | 170732442 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.881749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCATA TTCGCAATTT CTCGATCATC GCGCACATCG ACCATGGCAA GTCGACACTC GCGGATCGCA TCATCCAGGT ATGCGGCGGC CTCGCCGACC GTGAAATGGA AGCGCAGGTG CTCGACTCGA TGGACATCGA GCGCGAGCGC GGCATCACGA TCAAGGCGCA GACGGCCGCG TTGTCCTATC GCGCACGCGA CGGCAAGGTC TACAACCTGA ACCTGATCGA CACGCCGGGG CACGTCGACT TCTCGTACGA GGTCAGCCGT TCGCTGTCCG CGTGCGAAGG CGCGCTGCTG GTCGTCGACG CGAGCCAGGG CGTCGAGGCG CAGACGGTCG CGAACTGCTA CACGGCGATC GAGCTCGGCG TCGAGGTCGT GCCGGTGCTG AACAAGATCG ACCTGCCGGC CGCGAACCCC GAGAACGCGA TCGAGGAGAT CGAGGACGTG ATCGGCATCG ACGCGACCGA CGCGACGCGC TGCAGCGCGA AGACGGGGCT CGGCGTGGAA GACGTGCTCG AGTCGCTGAT CGCGAAGGTG CCGCCGCCGA AGGGCGATCC GGCCGCGCCG CTGCAGGCGC TGATCATCGA TTCGTGGTTC GACAACTACG TCGGCGTCGT GATGCTCGTG CGCATCGTCA ATGGCACGCT GCGCCCGAAG GACAAGATCA AGATGATGGC GACCGGTGCG CAGTATCCGG TCGAGCACGT CGGCGTGTTC ACGCCGAAGT CGCGCAATCT CGACTCGCTG TCGGCCGGGC AGGTGGGCTT CATCATCGCC GGCATCAAGG AACTGACGGC CGCGAAGGTC GGCGATACCG TCACGCACGC GGCCAAGGCC GCCGCCGAGC CGCTGCCGGG CTTCAAGGAA GTGAAGCCGC AGGTGTTCGC GGGGCTGTAT CCGGTCGAGG CGAACCAGTA CGACGCGCTG CGCGAATCGC TCGAGAAGCT GAAGCTGAAC GACGCATCGC TGCAGTACGA GCCGGAAGTG TCGCAGGCGC TCGGCTTCGG TTTCCGCTGC GGCTTCCTCG GGCTGCTGCA CATGGAAATC GTGCAGGAGC GGCTCGAGCG CGAATTCGAC ATGGATCTCA TCACGACCGC GCCGACGGTC GTCTACGAGG TCGTGCAGAG CGACGGCTCG ACGATCATGG TCGAGAACCC GGCGAAGATG CCGGAGCCCG GCCGCATCGC CGAAGTCCGC GAGCCGATCG TCACCGTGAA TCTCTACATG CCGCAGGATT ACGTCGGCTC GGTGATCACG CTGTGCGAGC AGAAGCGCGG CTCGCAGATC AACATGCAGT ATCACGGCCG CCAGGTGCAG CTCACGTACG AGATCCCGAT GGCGGAAATC GTGCTCGACT TCTTCGATCG CCTGAAGTCG GTGTCGCGCG GCTATGCGTC GATGGACTAC GAGTTCAAGG AATACCGTTC GTCGGACGTC GTGAAGGTCG ACATGCTCAT CAACGGCGAC AAGGTCGACG CGCTGTCGAT CATCGTGCAC CGGTCGCAGT CGCAATACCG CGGCCGGGAA GTTGCCGCGA AGATGCGCGA GATCATTCCG CGCCAGATGT ACGACGTGGC GATCCAGGCC GCGATCGGCG CGCACATCGT CGCGCGCGAG AACATCAAGG CACTGCGCAA GAACGTGCTC GCGAAGTGCT ACGGCGGTGA CATCACGCGG AAGAAGAAAC TGCTCGAGAA GCAGAAAGAA GGTAAGAAAC GGATGAAGCA GGTGGGTTCG GTCGAGATCC CGCAGGAGGC GTTCCTCGCG ATCTTGCGCG TCGAAGACAA ATAA
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Protein sequence | MDHIRNFSII AHIDHGKSTL ADRIIQVCGG LADREMEAQV LDSMDIERER GITIKAQTAA LSYRARDGKV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAI ELGVEVVPVL NKIDLPAANP ENAIEEIEDV IGIDATDATR CSAKTGLGVE DVLESLIAKV PPPKGDPAAP LQALIIDSWF DNYVGVVMLV RIVNGTLRPK DKIKMMATGA QYPVEHVGVF TPKSRNLDSL SAGQVGFIIA GIKELTAAKV GDTVTHAAKA AAEPLPGFKE VKPQVFAGLY PVEANQYDAL RESLEKLKLN DASLQYEPEV SQALGFGFRC GFLGLLHMEI VQERLEREFD MDLITTAPTV VYEVVQSDGS TIMVENPAKM PEPGRIAEVR EPIVTVNLYM PQDYVGSVIT LCEQKRGSQI NMQYHGRQVQ LTYEIPMAEI VLDFFDRLKS VSRGYASMDY EFKEYRSSDV VKVDMLINGD KVDALSIIVH RSQSQYRGRE VAAKMREIIP RQMYDVAIQA AIGAHIVARE NIKALRKNVL AKCYGGDITR KKKLLEKQKE GKKRMKQVGS VEIPQEAFLA ILRVEDK
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