| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1060 |
|---|
| Symbol | |
|---|
| ID | 6122740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1165379 |
|---|
| End bp | 1166041 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641637632 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001764359 |
|---|
| Protein GI | 170732412 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000437379 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.289763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACTT CCGCTGCCCG TCGCCAGATC CTCGCGCGCA TCCGCGCGGC GCAGGGGCGC
GCGGCCGAAC CCGATGCAGC GGAGCGCGAC GGCGTCGCCG ACTATCTCGC CCGTCATCCG
GAGGGCCCGC GCCCGCCGGC GCCGGCGGAC CTCGTCGCCG CTTTCGTCGA CGAAGCGGGG
CGTCTGTCGA CCACGGTCGA CGAAGTCGCG ACGCTGGCCG ATGTGCCCGC CGCCGCCGCC
CGCTATCTTG CCGCTCATGG TCTGCCGACG CAGGCCGTCG CATGGCGCAC GCTGGCCGAT
CTCGACTGGG CCGGCGCCGG CCTGTCGGTC GAGTGCCGCA GGCCGCGCGA CGGCGATCTC
GTCGGCCTGA CCGGCTGCTT CTGCGCGACC GCCGAAACGG GGTCGCTGGT GTTGCTGTCC
GGCCCCGACA CTTACGCATC GGCCGGCCTG CTGCCGGAAA CCCACATCGC GATCGTGACG
GCGTCACGCA TCGTCGCCGG TCATGAAGAC GCGTTCGCAC TGATTCGCGC GGAGCGCGGC
GAATTGCCGC GCGCGGTCAA TTTCGTGTCG GGCCCGTCGC GCACGGGCGA CATCGAGCAA
ACGATCATTC TGGGCGCGCA CGGCCCGTAC CGCGTGCACG CGATCGTCGT ACGGGGCGCC
TGA
|
|---|
| Protein sequence | MDTSAARRQI LARIRAAQGR AAEPDAAERD GVADYLARHP EGPRPPAPAD LVAAFVDEAG
RLSTTVDEVA TLADVPAAAA RYLAAHGLPT QAVAWRTLAD LDWAGAGLSV ECRRPRDGDL
VGLTGCFCAT AETGSLVLLS GPDTYASAGL LPETHIAIVT ASRIVAGHED AFALIRAERG
ELPRAVNFVS GPSRTGDIEQ TIILGAHGPY RVHAIVVRGA
|
|---|
| |