Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_1049 |
Symbol | fumC |
ID | 6122729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 1155253 |
End bp | 1156647 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641637619 |
Product | fumarate hydratase |
Protein accession | YP_001764348 |
Protein GI | 170732401 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.994408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.827821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAG CAGTTCGGAT GGAACGCGAC ACGTTCGGCG AGATCGCCGT GCCGGCCGAC CGGCTCTGGG GCGCGCAGAC CGAGCGCTCG CTGCAGAATT TCCGGATCTC GACGGAGAAG CAGTCGCCCG AGCTGATCCA CGCGCTCGCG ATCGTCAAGC GCGCCGCGGC GGCCGTCAAC CAGTCGCTCG GCGTGCTCGC CGACGACAAG GCGCACGCGA TCATCGAAGC CGCCGACGAG ATCATCGCCG GCAAGCATCC GCGCGAATTC CCGCTGGCGG TGTGGCAGAC GGGCTCCGGC ACGCAGACCA ACATGAACCT CAACGAGGTG ATTGCGAACC GCGCGAGCGA GCTGCTGGGC GGCGAGCGCG GCGAAGCGCG CAAGGTCCAT CCGAACGACG ACGTGAACCG CGGCCAGTCG TCGAACGACG TGTTCCCGAC CGCGATGCAC ATCGCGGCCG CGTATGCGAT CGTCAATCAC CTGCTGCCGG CGCTGCGCAC GCTGCGCGCG ACGCTCGACG CGAAGTCGAA GGCGTTCGCC GACATCGTCA AGATCGGCCG CACCCACCTG CAGGACGCCA CGCCGCTCAC GCTCGGCCAG GAGTTCTCCG GCTACGTCGC GCAGCTCGAC CAGGGCATCC GTCACGTCGA ATCGGCGCTG CCGCACCTGT ACGAGCTCGC GCTCGGCGGC ACCGCGGTCG GCACGGGGCT GAACGCGCAT CCGGAGTTCG CGGTGCGCGT GGCCGACGAG ATCGGCCGGC TCGCGAAGCT GCCGTTCGTG ACGGCGCCGA GCAAGTTCGA GGTGATGGCG GCCGCCGACG CGCTGGTGTT CGCGCACGGC GCGCTGAAAA CGGTCGCGGC CAGCCTGATG AAGATCGCGA ACGACGTGCG CTGGCTCGCG AGCGGGCCGC GCTGCGGGCT CGGCGAGCTG TCGATTCCGG AAAACGAGCC GGGCAGCTCG ATCATGCCGG GCAAGGTGAA TCCGACGCAG TCGGAAGCCG TGACGATGCT GTGCTGCCAG GTGTTCGGCA ACGACGTCGC GGTCAACGTC GGCGGCGCGA GCGGCAACTT CGAGCTGAAC GTGTTTCGGC CGATGATCGC GCACAACGTG CTGCAGTCGG TGCGGCTGCT CGCCGACGGC GCGCAGAGCT TCAACGATCA CTGCGCGGTG GGCATCGAGC CGAACCGCTC GCGCATCGAC CTGTTGCTGA ACGAATCGCT GATGCTCGTG ACGGCGCTCA ATCCGCACAT CGGCTACGAC AAGTCCGCGC AGATCGCGAA GAAGGCGCAC AAGGAAGGCA CGACGCTGAA GGCGGCCGCG CTCGCGCTCG GCTACCTGAC CGAGGCGGAA TTCGATGCAT GGGTGCGCCC CGAACAGATG ATCGGGACGC GGTAA
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Protein sequence | MNEAVRMERD TFGEIAVPAD RLWGAQTERS LQNFRISTEK QSPELIHALA IVKRAAAAVN QSLGVLADDK AHAIIEAADE IIAGKHPREF PLAVWQTGSG TQTNMNLNEV IANRASELLG GERGEARKVH PNDDVNRGQS SNDVFPTAMH IAAAYAIVNH LLPALRTLRA TLDAKSKAFA DIVKIGRTHL QDATPLTLGQ EFSGYVAQLD QGIRHVESAL PHLYELALGG TAVGTGLNAH PEFAVRVADE IGRLAKLPFV TAPSKFEVMA AADALVFAHG ALKTVAASLM KIANDVRWLA SGPRCGLGEL SIPENEPGSS IMPGKVNPTQ SEAVTMLCCQ VFGNDVAVNV GGASGNFELN VFRPMIAHNV LQSVRLLADG AQSFNDHCAV GIEPNRSRID LLLNESLMLV TALNPHIGYD KSAQIAKKAH KEGTTLKAAA LALGYLTEAE FDAWVRPEQM IGTR
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