Gene Bcenmc03_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_1015 
Symbol 
ID6122695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp1122990 
End bp1124207 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID641637585 
Productlytic murein transglycosylase B 
Protein accessionYP_001764314 
Protein GI170732367 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA GCAAGCCTGC CGCCCTTCTT TCCGCGCTGT TCCGTGTTCG CGCTCCGCTC 
GTCGTCGCTG CCATCGCCGC GGCCCTCGGC ACCGCGCCTG CCGTCGCACA AACGCAGCCG
GCGAAGCCTG CGGGCACGCT CGTCGCCCAG GCCCAGCCGC AGCAGCCGAC GCCGCAAGGC
CAGACCTTCG AAGAGGAAAT CGTTCCACAG CGTTACGCGA GCAACGCGAA GGTCGATGCC
TTCATCGACG AGATGGTGAG CCGCAACGGC TTCGATTCCG CGAGCCTGCA TGCGCTGTTC
TCGCGCATCA GCTACTCGGC GACGGCCGTC AAGCTCGTGA GGCCGGCCCC GACGCCCTCG
GTCAAGAACT GGCGCGTCTA TCGCTCGCGC TTCATCGAGC CGATCCGCAT CAACGCGGGC
GTGAAGTTCT GGAAGGCGAA CCGGGCGACG CTGCAGCGCG CGTCCGAACA GTTCGGCGTG
CCGCCCGAGG TGATCGTCGG CATCATCGGC GTCGAAACCA TCTATGGCCG CTACATGGGC
AATTTCCGCG TGCTGGACGC GCTGACGACG CTCACGTTCG ACTACCCGGA CACGCCGAAT
CGCGACAGCC GCCAGGCCAC CTTCCGCAAG AACCTCGAAG ACTTCCTGGT CTGGACCCGC
GACAACCAGC TCGACCCGAC CACCGTGCTC GGCTCGTACA CCGGCGCGAT CGGAATTCCG
CAGTTCCTGC CGAGCAGCAT CCGCGAATAT GCGGTCGACT TCGACGGCAC GGGCCACGTC
GATCTGCGCA GCAGTCCTGT CGATGCGATC GGCAGCGTCG CGAACTATCT GAAGCAGCAC
GGCTGGGAAA CCGACCGACC GGTGGTCTGG CAGATCACGC CGGACACGGG CAGCCTGGGC
ATCGCACAGG CCGCCGCCGA CGGCCAGCCC GAACCGCACT GGGCGCTGTC GCAACTGCTG
CGCGCCGGCA TGACGCTGAA CGAGCCGACG GTCAACATCA CGACCGAAGC CGGCACGCCG
GTGACGGTGG TCGACCTGCC GACGCCGGGG CGCGCGACCG AATACATGCT CGGCCTGAAG
AACTTCTATG TGCTGACGCG CTACAACCGC AGCTTCTTCT ACGCGCTCAC CGTGTACCAG
CTCGGCGAAG CCGTGAAAGC ACAGATGGAA GCGAGCGGCG CGCTGCAACC CGCCGCTGAC
GACGCGCAGC CGCAGTAA
 
Protein sequence
MNSSKPAALL SALFRVRAPL VVAAIAAALG TAPAVAQTQP AKPAGTLVAQ AQPQQPTPQG 
QTFEEEIVPQ RYASNAKVDA FIDEMVSRNG FDSASLHALF SRISYSATAV KLVRPAPTPS
VKNWRVYRSR FIEPIRINAG VKFWKANRAT LQRASEQFGV PPEVIVGIIG VETIYGRYMG
NFRVLDALTT LTFDYPDTPN RDSRQATFRK NLEDFLVWTR DNQLDPTTVL GSYTGAIGIP
QFLPSSIREY AVDFDGTGHV DLRSSPVDAI GSVANYLKQH GWETDRPVVW QITPDTGSLG
IAQAAADGQP EPHWALSQLL RAGMTLNEPT VNITTEAGTP VTVVDLPTPG RATEYMLGLK
NFYVLTRYNR SFFYALTVYQ LGEAVKAQME ASGALQPAAD DAQPQ