| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0937 |
|---|
| Symbol | lolA |
|---|
| ID | 6122617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 1038306 |
|---|
| End bp | 1038995 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641637501 |
|---|
| Product | outer-membrane lipoprotein carrier protein |
|---|
| Protein accession | YP_001764236 |
|---|
| Protein GI | 170732289 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
|---|
| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.723645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAAC ATTCGTTCGT CCCTTCCCTT CGTTCGACGC GGCGCTGGCT CGGCGCGGCG
CTCGCCGGCG CATCGCTGAT GCTCGCGGCG ACGCACGCGT TCGCGGGCGG CACCGAGCAA
CTGAAGGCCT TCGTGTCGCA GGTGCGTTCG GCGAAGGGCG ATTTCACCCA GCAGATCGTC
AAGGCGCCGG CCAAGGGCGC GAGCGCCGCG CAGGCCGCGC CGAAGCCCAC CGACAATTCG
AGCGGCACGT TCGTGTTCGC GCGGCCCGGC AAGTTCATCT GGACCTACCA GAAGCCTTAC
CAGCAGGTGC TGCAGGCCGA CGGCGACAAG CTTTACGTGT ACGACCGCGA CCTGAACCAG
GTCACCGAGC GCAAGCTGAA CGGCGCGCTG GGCGCGAGCC CGGCCGCGAT CCTGTTCGGC
AGCAACGATC TCGACAAGAA CTACACGCTG CGCGATGCGG GCGAGAAGGG CGGCATCGAC
TGGCTCGAGA TGCTGCCGAA GGCGCAGGAC ACGCAGTTCC AGCGGATCGG CATCGGCTTT
CGCAACGGCA CGCTCGCCGC GATGGAACTG CACGACGTGT TCGGCAACGT CACGCTGCTG
ACCTTCACGA ACATCCAGAC GAACCCGCCG CTGAAGGGCG ATACGTTCAA GTTCGTCGTG
CCGAAGGGCG CGGACGTGAT CAACGGCTGA
|
|---|
| Protein sequence | MQQHSFVPSL RSTRRWLGAA LAGASLMLAA THAFAGGTEQ LKAFVSQVRS AKGDFTQQIV
KAPAKGASAA QAAPKPTDNS SGTFVFARPG KFIWTYQKPY QQVLQADGDK LYVYDRDLNQ
VTERKLNGAL GASPAAILFG SNDLDKNYTL RDAGEKGGID WLEMLPKAQD TQFQRIGIGF
RNGTLAAMEL HDVFGNVTLL TFTNIQTNPP LKGDTFKFVV PKGADVING
|
|---|
| |