| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0899 |
|---|
| Symbol | |
|---|
| ID | 6122579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 998973 |
|---|
| End bp | 1000196 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641637463 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001764198 |
|---|
| Protein GI | 170732251 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCAT TAACAGGAAT CAAGGTCGTC GATCTGAGTC GCGCGCTGTC GGGGCCGTTC
TGCTCGATGG TGCTCGCGGA TCTCGGCGCC GACGTGATCA AGGTCGAATC GGGGCCGCAC
GGTGACATGA GCCGTGCGTG GGGGCCGTTC GATCGCGGCG TGAGCACGTA CTACCTGTCC
TGCAACCGCA ACAAGCGCGG CATCTGCGTG GACTTCCGGC AGCCGGCCGG CCTCGACGTC
GTGCGGCGCC TGATCGCGCA GGCCGACGTC GTGATCGAGA ATTTCAAGGC GGGCACGATG
GACGCGATGG GGCTCGGCTA TGCTGGGCTC AGCGCGCGCG ACCCGCGGCT CGTGATGGGC
AGCGTCACCG CGTTCGGCCC GCGCGGCCCG CTGCGCGACT GGCCGGGCTT CGACCAGATC
GCGCAGGGCT ATGCGGGGCT GATGAGTCTC ACCGGTTTCC CGGACGGCGA GCCGACCCGC
ACGGGCACCG CGATCGGCGA TCTCAGCTCG GGGATGTGGG TCGCGACCGG CGTAATGGCC
GCGCTGTTCG AGCGCGAGCG CACCGGGCGC GGCCAGCATG TCGGCACGTC GCTGCTCGAA
AGCCTCGTTG CGCTGCTGAG CGTGCATGGG CAACGCTACC TGAGCCTCGG CGACGTGCCG
CGCCGTACCG GCAATGCGCA TGCGGTGATC GCGCCGTACG GCGTGTTCGA GACGGCCGAC
GGCCCGCTCA ACCTCGCGCC GATCACGACC GACATGTGGC TGCGGCTGTG CCAGTTGCTG
GATCTGCCCG CGCTGCCCGA CGATCCGCGC TTCGCGACCA ACGATGCGCG CGTCGCGCAT
CGCGATGAGC TCAAGGCGCT GCTCGAAAGC CGGCTGCGCA CGCGCGGCAA GCGCGACTGG
ACGCAACGGT TCGTCGAGGC CGGGCTGCCG GCCGGCCCGA TTCATACGCT CGACGAAGTG
TTCGACGATC CGCAACTCGC GCATTGCGGG CTGGTCGAGC CGGTCGCGCA TCCGACGCTC
GGCACGCTGC GTCAGGTCGT CACGCCGCTC GGCGGGATGG GCGACGACCT GCCGGCGCCG
CGCACGCGCC ATGCGCCGCC GCTGCTCGGC GAGCATACGG TCGATGTGCT GCGCGAAGCC
GGCTACGGCG ACGACGCGAT CGACGCACTG CTGGCCGGGC GCGCGATCTT CCAGGCCGAT
GCGGTGGCGG AGGCCGTGCA ATGA
|
|---|
| Protein sequence | MQALTGIKVV DLSRALSGPF CSMVLADLGA DVIKVESGPH GDMSRAWGPF DRGVSTYYLS
CNRNKRGICV DFRQPAGLDV VRRLIAQADV VIENFKAGTM DAMGLGYAGL SARDPRLVMG
SVTAFGPRGP LRDWPGFDQI AQGYAGLMSL TGFPDGEPTR TGTAIGDLSS GMWVATGVMA
ALFERERTGR GQHVGTSLLE SLVALLSVHG QRYLSLGDVP RRTGNAHAVI APYGVFETAD
GPLNLAPITT DMWLRLCQLL DLPALPDDPR FATNDARVAH RDELKALLES RLRTRGKRDW
TQRFVEAGLP AGPIHTLDEV FDDPQLAHCG LVEPVAHPTL GTLRQVVTPL GGMGDDLPAP
RTRHAPPLLG EHTVDVLREA GYGDDAIDAL LAGRAIFQAD AVAEAVQ
|
|---|
| |