Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_0771 |
Symbol | |
ID | 6122452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 860129 |
End bp | 860578 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641637335 |
Product | protein TolR |
Protein accession | YP_001764071 |
Protein GI | 170732124 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.134242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAA GCCCCATCCG ATCCAGCATG CGCGGCGGCC GATCGCGCCG CGCGATGGCC GACATCAACG TCGTGCCGTA CATCGACGTG ATGCTGGTGC TGCTCGTGAT CTTCATGGTC ACCGCACCGC TCGTCGCCCC GTCGATCATC AACCTGCCGA CCGTCGGCAA CGCCGCGCCG CAGGAGCAGA CGCCACCCGT CGTCGTCAAC ATCAAGGCCG ACCGCACGAT GAGCGTCAAG TACAAGGGCG ACTCGGGCGC GACCCAGGAA GACACGATGA CGAAGGCCGA GCTCGACAGC TTCATCTCGG CCCGGCAGGC CGATCACCCT GACCAGCCGG TCGTGATCGC AGCCGACAAG ACCGTGCAGT ACGATGCCGT CATGACCGTG ATGTCCGATC TGAAGGCGCG TGGCGTCAAG CGCGTCGGCC TCCTCGTCAA ATCGCAATGA
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Protein sequence | MAGSPIRSSM RGGRSRRAMA DINVVPYIDV MLVLLVIFMV TAPLVAPSII NLPTVGNAAP QEQTPPVVVN IKADRTMSVK YKGDSGATQE DTMTKAELDS FISARQADHP DQPVVIAADK TVQYDAVMTV MSDLKARGVK RVGLLVKSQ
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