Gene Bcenmc03_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_0769 
SymboltolB 
ID6122450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp857672 
End bp858967 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content65% 
IMG OID641637333 
Producttranslocation protein TolB 
Protein accessionYP_001764069 
Protein GI170732122 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.103724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGA TGACAAAGCT AGGTTTCAGG GCACTCGTGG CCTCGTGTCT GATTACGGCG 
GGCAGCGCCG CTAACGCCCA GGTCAACGTG CTGATCACCG GTGTCGGGTC GACCCAGTTC
CCCATTGCCA CCGCGAACTT CACGAACGAG GCGAATCTGC CGCAGCAGAT CACGTCGATC
GTGCGCGCCG ACCTTGCCCG CAGCGGCAAA TTCACCAACA TCGACGCGGG CAGCACGCCC
GTGCCCGAGA CCGCCTCGGT CGATCTCGGC GCATGGAAGG CCAAGGGCGC GAATGCGTTC
GTCGCCGGCA GCGTGAACCG CGACGCGAAC GGTCAGTACA AGGTCAACTT CATCCTGTAC
GACACCGTGA AGCAGCAAAG CCTCGGCGGC CTGTCGCTGA CGGCCACCGA CACCACGCTG
CGCACGGCCG GCCACAAGAT CGCCGACTAC ATCTATCAGA AGCTGCTCGG CGTGCGCGGC
GTATTCGCCA CGCGCTTGTC GTACGTGATC AAGACCGGCA ACCGCTACCA GTTGCAGATT
TCGGATTCGG ATGGCCAGAA CGCGCGCATC GCGCTGTCGA GCACCGAGCC GATCATCTCG
CCGGCCTGGT CGCCGAGCGG CACGAAGGTC GCGTACGTAT CGTTCGAGCG CAAGAAGCCG
ATCGTCTACA TCCATGACTT GCCGACCGGC CGCCGCTACA TGGTCTCCGA CCAGAAGGGC
AACAACAGCG CACCGGCGTG GTCGCCGGAC AGCAACACGC TGGCCGTCGC GCTGTCGCTG
ACGGGCAATA CGCAAATCTA CACGGTCAAC GCGAACGGCG GCGGCCTGCG CCGTCTCACG
CAGAGCAGCT CGATCGACAC CGAACCGTTC TACTCGCCGG ACGGTCGTTG GATCTACTTC
ACGAGCGATC GTGGCGGTGC GCCGCAAATC TACCGGATGC CCGCGCAGGG TGAAAGCGCC
GGCGCCGCGC AGCGCGTGAC CTTCACCGGC AGCTACAACA CGAGCCCGCG CGTGAGCCCG
GACGGCAAGC TGCTCGCTTA CATCTCCCGC ACGGGTGGGG GCTTCAAGCT GTACGTTCAG
GATCTGCAGA CTGGCGCGGC GAACGCCATC ACGAATACCA ATCGCGACGA ATCGCCGAGC
TTCGCGGCAA ACGGCCAGTA CCTTCTGTAC GCTACCCAGT CGGGTGGTCG CAACGTTCTG
GCTGCAGTGC CCTCCGACGG CAGCGCGCCG CCGCAGATCC TGTCCGTCCA GGGCGGCTCC
GTTCGCGAGC CGTCGTGGGG GCCCTTCATG CAATGA
 
Protein sequence
MSLMTKLGFR ALVASCLITA GSAANAQVNV LITGVGSTQF PIATANFTNE ANLPQQITSI 
VRADLARSGK FTNIDAGSTP VPETASVDLG AWKAKGANAF VAGSVNRDAN GQYKVNFILY
DTVKQQSLGG LSLTATDTTL RTAGHKIADY IYQKLLGVRG VFATRLSYVI KTGNRYQLQI
SDSDGQNARI ALSSTEPIIS PAWSPSGTKV AYVSFERKKP IVYIHDLPTG RRYMVSDQKG
NNSAPAWSPD SNTLAVALSL TGNTQIYTVN ANGGGLRRLT QSSSIDTEPF YSPDGRWIYF
TSDRGGAPQI YRMPAQGESA GAAQRVTFTG SYNTSPRVSP DGKLLAYISR TGGGFKLYVQ
DLQTGAANAI TNTNRDESPS FAANGQYLLY ATQSGGRNVL AAVPSDGSAP PQILSVQGGS
VREPSWGPFM Q