| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0620 |
|---|
| Symbol | |
|---|
| ID | 6122301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 677794 |
|---|
| End bp | 678249 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641637183 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001763920 |
|---|
| Protein GI | 170731973 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCG GCGGGCTCGA GCACCACAAG ACGTCCGCGC CGATGGCGGA GATCAACATG
ACGCCGCTGA TCGACGTGAT GCTCGTGCTG CTCGTCATCT TCATCATCAC CGCGCCGCTG
ATGACGCACG CGATCCGGCT CGATCTGCCG AAGGTCGCGG CCAGCGTCGC GCGCGACACG
CCGCAATCCG TCACCTTGTC GATCGACGAC GCGGGCAAGC TCTACTGGGA CGACGCGCCC
GTGGCGCTCG ACGCGCTGCC CGCGCGGTTC AAGGCCGCCG CCGCGGGCGC CGCGCCGCCC
GAGCTGCGGC TGCGCGCGTC GCGCGCGACG CGCTACGACG TGATCGCGCA GGTGATGGGC
GCCGCGCAGG CCGCGGGTCT CACGCGGATC GGCTTCGTGA CCGACGTGCC GCCGGCGGGT
GCCGCGGCGC CTGCCGCCAC CGGCGCGAAA CCCTGA
|
|---|
| Protein sequence | MAFGGLEHHK TSAPMAEINM TPLIDVMLVL LVIFIITAPL MTHAIRLDLP KVAASVARDT
PQSVTLSIDD AGKLYWDDAP VALDALPARF KAAAAGAAPP ELRLRASRAT RYDVIAQVMG
AAQAAGLTRI GFVTDVPPAG AAAPAATGAK P
|
|---|
| |