| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_0588 |
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| Symbol | |
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| ID | 6122269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 644965 |
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| End bp | 645747 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641637151 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001763888 |
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| Protein GI | 170731941 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.194347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0391008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCC GCCTCGCGGG CAAGGTCGCG ATGGTGACGG GCGCGGGCCG CGGCATCGGC
GCCGCGATCG CGCGTGCGTT CGTGCGCGAA GGCGCGGCCG TCGCGCTCGT CGACCTCGAC
TTCCCGCAGG CGCAGCACAC GGCCGCCGCG ATCGCACACG AATGCGACGG CGCGCGCGTG
CTGCCGCTGC AGGCCGATGT CGCGCAGCAG CAGGCGGTGC GCGAGGCGCT CGCGCGGACG
GAAGCGGCGT TCGGCCCGCT CGACGTGCTC GTGAACAACG CGGGCATCAA CGTGTTCGCC
GATCCGCTGA CGATGACCGA CGACGACTGG CGCCGCTGCT TCGCGGTCGA TCTCGACGGC
GTGTGGCACG GTTGCCGCGC GGCGCTGGAG GGCATGGTCG AGCGCGGCCG CGGCAGCATC
GTGAACATCG CGTCGACGCA TGCGTTCAGG ATCATCCCGG GCTGCTTTCC GTACCCGGTC
GCGAAGCACG GCGTGCTCGG TCTCACACGC GCGCTCGGCA TCGAATACGC GGCGCGCAAC
GTGCGCGTGA ACGCGATCGC GCCGGGCTAC ATCGAGACGC AGCTGACGCG CGACTGGTGG
GACGCGCAGC CCGATCCGGC CGCCGCGCGC GCCGAGACGC TCGCGCTGCA GCCGATGAAG
CGGATCGGCC GCCCGGAGGA GGTCGCGATG ACGGCCGTGT TCCTCGCGTC CGACGAGGCG
CCGTTCATCA ATGCCACGTG CATCACCGTC GATGGCGGGC GCGCGGCGCT GTATCACGAC
TGA
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| Protein sequence | MMGRLAGKVA MVTGAGRGIG AAIARAFVRE GAAVALVDLD FPQAQHTAAA IAHECDGARV
LPLQADVAQQ QAVREALART EAAFGPLDVL VNNAGINVFA DPLTMTDDDW RRCFAVDLDG
VWHGCRAALE GMVERGRGSI VNIASTHAFR IIPGCFPYPV AKHGVLGLTR ALGIEYAARN
VRVNAIAPGY IETQLTRDWW DAQPDPAAAR AETLALQPMK RIGRPEEVAM TAVFLASDEA
PFINATCITV DGGRAALYHD
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